Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:43985920-44685933

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq6 2 31313023 to 44618192 13305169 QTL conditioned fear QTL 6
Arhgap15 2 43748824 to 44395953 647129 + protein coding gene Rho GTPase activating protein 15
5830407E08Rik 2 43992539 to 43996586 4047 unclassified gene RIKEN cDNA 5830407E08 gene
Tssr17608 2 43997301 to 43997312 11 + TSS region transcription start site region 17608
Tssr17609 2 44029650 to 44029655 5 + TSS region transcription start site region 17609
Arhgap15os 2 44059238 to 44065324 6086 - antisense lncRNA gene Rho GTPase activating protein 15, opposite strand
Tssr17610 2 44118185 to 44118209 24 + TSS region transcription start site region 17610
Tssr17611 2 44160234 to 44160237 3 + TSS region transcription start site region 17611
Tssr17612 2 44160884 to 44160894 10 + TSS region transcription start site region 17612
A430068E04Rik 2 44201369 to 44204948 3579 unclassified gene RIKEN cDNA A430068E04 gene
Tssr17613 2 44243127 to 44243155 28 + TSS region transcription start site region 17613
Tssr17614 2 44310611 to 44310612 1 + TSS region transcription start site region 17614
Tssr17615 2 44335879 to 44335888 9 + TSS region transcription start site region 17615
Tssr17616 2 44335920 to 44335933 13 + TSS region transcription start site region 17616
Tssr17617 2 44341762 to 44341767 5 + TSS region transcription start site region 17617
Gm22867 2 44428935 to 44429043 108 + snRNA gene predicted gene, 22867
Gm39805 2 44432260 to 44462504 30244 + lncRNA gene predicted gene, 39805
Gm39806 2 44495300 to 44501041 5741 - lncRNA gene predicted gene, 39806
Tssr23875 2 44539372 to 44539379 7 - TSS region transcription start site region 23875
Cpgi11627 2 44556772 to 44557341 569 CpG island CpG island 11627
Gtdc1 2 44564412 to 44927657 363245 - protein coding gene glycosyltransferase-like domain containing 1
Tssr23876 2 44635237 to 44635252 15 - TSS region transcription start site region 23876
Gm39807 2 44667569 to 44668705 1136 - lncRNA gene predicted gene, 39807