MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:39053087-39213090

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Golga1	2	39016155 to 39065541	49386	-	protein coding gene	golgi autoantigen, golgin subfamily a, 1
Cpgi11621	2	39065048 to 39065883	835		CpG island	CpG island 11621
Tssr23840	2	39065438 to 39065503	65	-	TSS region	transcription start site region 23840
Tssr23841	2	39065505 to 39065570	65	-	TSS region	transcription start site region 23841
Scai	2	39066214 to 39190730	124516	-	protein coding gene	suppressor of cancer cell invasion
Gm30067	2	39080119 to 39116581	36462	+	lncRNA gene	predicted gene, 30067
Tssr23842	2	39133087 to 39133090	3	-	TSS region	transcription start site region 23842
Gm18791	2	39153964 to 39154686	722	+	pseudogene	predicted gene, 18791
Gm16523	2	39157486 to 39162235	4749	-	pseudogene	predicted gene, 16523
D2Mit320	2	39159635 to 39159754	119		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 320
Gm44027	2	39178562 to 39182041	3479	-	unclassified gene	predicted gene, 44027
Tssr23843	2	39185551 to 39185554	3	-	TSS region	transcription start site region 23843
Cpgi11622	2	39190028 to 39191105	1077		CpG island	CpG island 11622
Tssr23844	2	39190662 to 39190685	23	-	TSS region	transcription start site region 23844
Tssr23845	2	39190687 to 39190746	59	-	TSS region	transcription start site region 23845
Ppp6c	2	39194369 to 39226338	31969	-	protein coding gene	protein phosphatase 6, catalytic subunit
Tssr23846	2	39196552 to 39196573	21	-	TSS region	transcription start site region 23846
Tssr23847	2	39196864 to 39196880	16	-	TSS region	transcription start site region 23847