MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:38636158-38722651

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Psmb7	2	38588046 to 38643952	55906	-	protein coding gene	proteasome (prosome, macropain) subunit, beta type 7
Gm27634	2	38637018 to 38637143	125	-	miRNA gene	predicted gene, 27634
Cpgi11611	2	38643346 to 38644109	763		CpG island	CpG island 11611
Tssr23823	2	38643405 to 38643420	15	-	TSS region	transcription start site region 23823
Tssr23824	2	38643905 to 38643927	22	-	TSS region	transcription start site region 23824
Cpgi11612	2	38658467 to 38658752	285		CpG island	CpG island 11612
Gm36744	2	38669475 to 38670922	1447	-	lncRNA gene	predicted gene, 36744
Adgrd2-ps	2	38671158 to 38687651	16493	+	pseudogene	adhesion G protein-coupled receptor D2, pseudogene
Cpgi11613	2	38671943 to 38672577	634		CpG island	CpG island 11613
Gm13587	2	38672537 to 38676552	4015	+	unclassified non-coding RNA gene	predicted gene 13587
Cpgi11614	2	38688991 to 38689349	358		CpG island	CpG island 11614
Nr5a1	2	38692656 to 38714542	21886	-	protein coding gene	nuclear receptor subfamily 5, group A, member 1
Tssr23825	2	38708358 to 38708403	45	-	TSS region	transcription start site region 23825
Cpgi11615	2	38710171 to 38712657	2486		CpG island	CpG island 11615
Tssr23826	2	38712195 to 38712210	15	-	TSS region	transcription start site region 23826
Nr5a1os	2	38712676 to 38720638	7962	+	antisense lncRNA gene	nuclear receptor subfamily 5, group A, member 1, opposite strand
Tssr23827	2	38712836 to 38712861	25	-	TSS region	transcription start site region 23827
Tssr23828	2	38714491 to 38714514	23	-	TSS region	transcription start site region 23828