Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:3775808-4079139

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam107b 2 3704812 to 3782142 77330 + protein coding gene family with sequence similarity 107, member B
D2Mit356a 2 3778683 to 3778728 45 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 356a
D2Mit356b 2 3778683 to 3778795 112 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 356b
Tssr388 2 3779887 to 3779917 30 + TSS region transcription start site region 388
Tssr15922 2 3779922 to 3779938 16 + TSS region transcription start site region 15922
Tssr15923 2 3780090 to 3780114 24 + TSS region transcription start site region 15923
Tssr15924 2 3780923 to 3780929 6 + TSS region transcription start site region 15924
Tssr389 2 3781828 to 3781832 4 + TSS region transcription start site region 389
Gm36031 2 3807845 to 3824328 16483 + lncRNA gene predicted gene, 36031
Tssr15925 2 3810195 to 3810210 15 + TSS region transcription start site region 15925
Gm13180 2 3855030 to 3877575 22545 + lincRNA gene predicted gene 13180
D2Mit1 2 3886089 to 3886211 122 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 1
Orgwq2 2 3886089 to 93591306 89705217 QTL organ weight QTL 2
Gm13191 2 3925808 to 3929139 3331 - lincRNA gene predicted gene 13191
D2Mit115 2 3928829 to 3928983 154 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 115
D2Mit231 2 3932099 to 3932248 149 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 231
Tssr390 2 4017685 to 4017696 11 + TSS region transcription start site region 390
Tssr15926 2 4017706 to 4017722 16 + TSS region transcription start site region 15926
Frmd4a 2 4017717 to 4614043 596326 + protein coding gene FERM domain containing 4A
Tssr15927 2 4017727 to 4017745 18 + TSS region transcription start site region 15927
Tssr15928 2 4017757 to 4017768 11 + TSS region transcription start site region 15928
Gm2639 2 4051263 to 4052559 1296 - pseudogene predicted gene 2639
Tssr15929 2 4057908 to 4057919 11 + TSS region transcription start site region 15929
Tssr15930 2 4058104 to 4058134 30 + TSS region transcription start site region 15930