Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:37373845-38033885

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rc3h2 2 37370069 to 37422903 52834 - protein coding gene ring finger and CCCH-type zinc finger domains 2
Tssr23753 2 37374665 to 37374669 4 - TSS region transcription start site region 23753
Snord90 2 37400061 to 37400128 67 - snoRNA gene small nucleolar RNA, C/D box 90
Cpgi11592 2 37422248 to 37423217 969 CpG island CpG island 11592
Tssr23754 2 37422895 to 37422958 63 - TSS region transcription start site region 23754
Tssr23755 2 37423006 to 37423055 49 - TSS region transcription start site region 23755
Zbtb6 2 37425500 to 37430919 5419 - protein coding gene zinc finger and BTB domain containing 6
Tssr23756 2 37428251 to 37428284 33 - TSS region transcription start site region 23756
Cpgi11593 2 37430553 to 37431208 655 CpG island CpG island 11593
Tssr23757 2 37430808 to 37430821 13 - TSS region transcription start site region 23757
Tssr23758 2 37430835 to 37430898 63 - TSS region transcription start site region 23758
Tssr17521 2 37430924 to 37430973 49 + TSS region transcription start site region 17521
Zbtb26 2 37432168 to 37443121 10953 - protein coding gene zinc finger and BTB domain containing 26
Cpgi11594 2 37442944 to 37443559 615 CpG island CpG island 11594
Tssr23759 2 37443096 to 37443178 82 - TSS region transcription start site region 23759
Tssr17522 2 37443273 to 37443339 66 + TSS region transcription start site region 17522
Rabgap1 2 37443281 to 37566454 123173 + protein coding gene RAB GTPase activating protein 1
Tssr17523 2 37443342 to 37443359 17 + TSS region transcription start site region 17523
Cpgi11595 2 37451982 to 37452686 704 CpG island CpG island 11595
Tssr17524 2 37452216 to 37452230 14 + TSS region transcription start site region 17524
Tssr17525 2 37452231 to 37452286 55 + TSS region transcription start site region 17525
Gm17893 2 37488675 to 37489444 769 + pseudogene predicted gene, 17893
Tssr17526 2 37505396 to 37505400 4 + TSS region transcription start site region 17526
Tssr17527 2 37516592 to 37516606 14 + TSS region transcription start site region 17527
Tssr17528 2 37516618 to 37516634 16 + TSS region transcription start site region 17528
Gpr21 2 37516626 to 37519281 2655 + protein coding gene G protein-coupled receptor 21
Tssr17529 2 37532775 to 37532779 4 + TSS region transcription start site region 17529
Tssr17530 2 37551386 to 37551389 3 + TSS region transcription start site region 17530
Strbp 2 37569868 to 37703967 134099 - protein coding gene spermatid perinuclear RNA binding protein
Tssr23760 2 37573613 to 37573617 4 - TSS region transcription start site region 23760
Tssr23761 2 37577572 to 37577588 16 - TSS region transcription start site region 23761
Tssr23762 2 37583052 to 37583056 4 - TSS region transcription start site region 23762
Tssr23763 2 37585879 to 37585882 3 - TSS region transcription start site region 23763
Tssr23764 2 37591575 to 37591578 3 - TSS region transcription start site region 23764
Tssr23765 2 37592727 to 37592731 4 - TSS region transcription start site region 23765
Tssr23766 2 37632923 to 37632926 3 - TSS region transcription start site region 23766
Tssr23767 2 37647199 to 37647229 30 - TSS region transcription start site region 23767
Tssr23768 2 37656526 to 37656529 3 - TSS region transcription start site region 23768
Gm44063 2 37659146 to 37659521 375 + pseudogene predicted gene, 44063
Tssr23769 2 37661160 to 37661164 4 - TSS region transcription start site region 23769
Gm13543 2 37672208 to 37673003 795 + pseudogene predicted gene 13543
Tssr23770 2 37677896 to 37677901 5 - TSS region transcription start site region 23770
Mir5128 2 37688201 to 37688284 83 - miRNA gene microRNA 5128
Tssr23771 2 37689156 to 37689159 3 - TSS region transcription start site region 23771
Cpgi11596 2 37702378 to 37704031 1653 CpG island CpG island 11596
Tssr23772 2 37703067 to 37703094 27 - TSS region transcription start site region 23772
Tssr23773 2 37703279 to 37703290 11 - TSS region transcription start site region 23773
Tssr23774 2 37703299 to 37703382 83 - TSS region transcription start site region 23774
Tssr23775 2 37703845 to 37703885 40 - TSS region transcription start site region 23775
Cpgi11597 2 37765249 to 37765443 194 CpG island CpG island 11597
Tssr17531 2 37776229 to 37776258 29 + TSS region transcription start site region 17531
Crb2 2 37776249 to 37799103 22854 + protein coding gene crumbs family member 2
Tssr17532 2 37776259 to 37776274 15 + TSS region transcription start site region 17532
Tssr17533 2 37776281 to 37776297 16 + TSS region transcription start site region 17533
Cpgi11598 2 37786245 to 37787386 1141 CpG island CpG island 11598
Cpgi11599 2 37790942 to 37791195 253 CpG island CpG island 11599
Cpgi11600 2 37792814 to 37794007 1193 CpG island CpG island 11600
Dennd1a 2 37798990 to 38287384 488394 - protein coding gene DENN/MADD domain containing 1A
Tssr23776 2 37801018 to 37801030 12 - TSS region transcription start site region 23776
Tssr23777 2 37801212 to 37801226 14 - TSS region transcription start site region 23777
Tssr23778 2 37802175 to 37802204 29 - TSS region transcription start site region 23778
Tssr23779 2 37811003 to 37811007 4 - TSS region transcription start site region 23779
Tssr23780 2 37843926 to 37843944 18 - TSS region transcription start site region 23780
Tssr23781 2 37896596 to 37896618 22 - TSS region transcription start site region 23781
Tssr23782 2 37914665 to 37914669 4 - TSS region transcription start site region 23782
Tssr23783 2 37919986 to 37920008 22 - TSS region transcription start site region 23783
Tssr23784 2 37975366 to 37975373 7 - TSS region transcription start site region 23784
Tssr17534 2 38003483 to 38003484 1 + TSS region transcription start site region 17534
Gm44283 2 38015218 to 38019167 3949 - unclassified gene predicted gene, 44283
Gm44443 2 38025795 to 38031427 5632 + unclassified gene predicted gene, 44443