Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:35132260-35432616

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cntrl 2 35109492 to 35178822 69330 + protein coding gene centriolin
Cpgi11565 2 35132300 to 35132615 315 CpG island CpG island 11565
Rab14 2 35180205 to 35201120 20915 - protein coding gene RAB14, member RAS oncogene family
Tssr23694 2 35181680 to 35181717 37 - TSS region transcription start site region 23694
Tssr23695 2 35182294 to 35182325 31 - TSS region transcription start site region 23695
Cpgi11566 2 35199910 to 35201453 1543 CpG island CpG island 11566
Tssr23696 2 35200796 to 35200825 29 - TSS region transcription start site region 23696
Tssr23697 2 35200923 to 35201069 146 - TSS region transcription start site region 23697
Cpgi11567 2 35224457 to 35224654 197 CpG island CpG island 11567
Tssr17456 2 35224516 to 35224548 32 + TSS region transcription start site region 17456
Gm13605 2 35224533 to 35226685 2152 + lincRNA gene predicted gene 13605
Cpgi11568 2 35256084 to 35256841 757 CpG island CpG island 11568
Tssr17457 2 35256365 to 35256448 83 + TSS region transcription start site region 17457
Gsn 2 35256380 to 35307892 51512 + protein coding gene gelsolin
Tssr17458 2 35259653 to 35259657 4 + TSS region transcription start site region 17458
Gm39796 2 35262665 to 35266812 4147 - lncRNA gene predicted gene, 39796
Tssr17459 2 35266764 to 35266845 81 + TSS region transcription start site region 17459
Gm39795 2 35267662 to 35280451 12789 - lncRNA gene predicted gene, 39795
Gm43128 2 35280390 to 35282010 1620 + unclassified gene predicted gene 43128
Cpgi11569 2 35282260 to 35282616 356 CpG island CpG island 11569
Tssr17460 2 35282299 to 35282318 19 + TSS region transcription start site region 17460
Tssr17461 2 35282321 to 35282329 8 + TSS region transcription start site region 17461
Tssr17462 2 35282427 to 35282442 15 + TSS region transcription start site region 17462
Tssr17463 2 35283992 to 35284014 22 + TSS region transcription start site region 17463
Tssr17464 2 35284698 to 35284709 11 + TSS region transcription start site region 17464
Tssr17465 2 35284771 to 35284787 16 + TSS region transcription start site region 17465
Tssr17466 2 35292627 to 35292639 12 + TSS region transcription start site region 17466
Tssr17467 2 35292654 to 35292686 32 + TSS region transcription start site region 17467
Tssr23698 2 35303266 to 35303272 6 - TSS region transcription start site region 23698
Stom 2 35313986 to 35336976 22990 - protein coding gene stomatin
Tssr23699 2 35315222 to 35315248 26 - TSS region transcription start site region 23699
Tssr23700 2 35315273 to 35315285 12 - TSS region transcription start site region 23700
Tssr23701 2 35315426 to 35315448 22 - TSS region transcription start site region 23701
Tssr23702 2 35315495 to 35315506 11 - TSS region transcription start site region 23702
Tssr23703 2 35315637 to 35315648 11 - TSS region transcription start site region 23703
Tssr17468 2 35331070 to 35331073 3 + TSS region transcription start site region 17468
Cpgi11570 2 35336495 to 35337272 777 CpG island CpG island 11570
Tssr23704 2 35336969 to 35336983 14 - TSS region transcription start site region 23704
Tssr23705 2 35337003 to 35337017 14 - TSS region transcription start site region 23705
Tssr17469 2 35340337 to 35340366 29 + TSS region transcription start site region 17469
Gm13443 2 35340409 to 35340963 554 + pseudogene predicted gene 13443
Tssr479 2 35341560 to 35341565 5 + TSS region transcription start site region 479
4930568D16Rik 2 35354218 to 35367729 13511 - protein coding gene RIKEN cDNA 4930568D16 gene
Tssr23706 2 35367716 to 35367726 10 - TSS region transcription start site region 23706
Tssr23707 2 35367730 to 35367737 7 - TSS region transcription start site region 23707
4930402F06Rik 2 35375562 to 35397174 21612 - protein coding gene RIKEN cDNA 4930402F06 gene
Gm39797 2 35376280 to 35387709 11429 + lncRNA gene predicted gene, 39797
Tssr23708 2 35397174 to 35397208 34 - TSS region transcription start site region 23708
Ggta1 2 35400179 to 35463231 63052 - protein coding gene glycoprotein galactosyltransferase alpha 1, 3
Tssr23709 2 35402376 to 35402391 15 - TSS region transcription start site region 23709
D2Mit515 2 35406491 to 35406607 116 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-515
Tssr17470 2 35426545 to 35426549 4 + TSS region transcription start site region 17470
Tssr23710 2 35432552 to 35432623 71 - TSS region transcription start site region 23710