MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:34787675-34827676

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rabepk	2	34777556 to 34799912	22356	-	protein coding gene	Rab9 effector protein with kelch motifs
Tssr23650	2	34790331 to 34790356	25	-	TSS region	transcription start site region 23650
Cpgi11557	2	34799493 to 34799964	471		CpG island	CpG island 11557
Tssr23651	2	34799711 to 34799726	15	-	TSS region	transcription start site region 23651
Tssr23652	2	34799767 to 34799826	59	-	TSS region	transcription start site region 23652
Tssr23653	2	34799832 to 34799884	52	-	TSS region	transcription start site region 23653
2700071L08Rik	2	34801652 to 34802800	1148		unclassified non-coding RNA gene	RIKEN cDNA 2700071L08 gene
Cpgi11558	2	34802135 to 34802690	555		CpG island	CpG island 11558
4930550L05Rik	2	34802317 to 34811905	9588		unclassified gene	RIKEN cDNA 4930550L05 gene
Tssr17430	2	34802336 to 34802391	55	+	TSS region	transcription start site region 17430
Fbxw2	2	34804514 to 34826311	21797	-	protein coding gene	F-box and WD-40 domain protein 2
Tssr23654	2	34807675 to 34807676	1	-	TSS region	transcription start site region 23654
Tssr23655	2	34821618 to 34821630	12	-	TSS region	transcription start site region 23655
Cpgi11559	2	34825854 to 34826419	565		CpG island	CpG island 11559
Tssr23656	2	34826076 to 34826087	11	-	TSS region	transcription start site region 23656
Tssr23657	2	34826160 to 34826181	21	-	TSS region	transcription start site region 23657
Tssr23658	2	34826187 to 34826240	53	-	TSS region	transcription start site region 23658
Tssr17431	2	34826278 to 34826299	21	+	TSS region	transcription start site region 17431