Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:33798289-34327735

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mvb12b 2 33729953 to 33887946 157993 - protein coding gene multivesicular body subunit 12B
Gm33856 2 33794214 to 33798487 4273 + lncRNA gene predicted gene, 33856
Tssr17397 2 33805807 to 33805819 12 + TSS region transcription start site region 17397
Nron 2 33805816 to 33813591 7775 + antisense lncRNA gene non-protein coding RNA, repressor of NFAT
Tssr17398 2 33805854 to 33805875 21 + TSS region transcription start site region 17398
Tssr17399 2 33825098 to 33825108 10 + TSS region transcription start site region 17399
Tssr23615 2 33855166 to 33855171 5 - TSS region transcription start site region 23615
Cpgi11549 2 33886579 to 33888247 1668 CpG island CpG island 11549
Tssr23616 2 33887367 to 33887381 14 - TSS region transcription start site region 23616
Tssr23617 2 33887383 to 33887400 17 - TSS region transcription start site region 23617
Tssr23618 2 33887407 to 33887420 13 - TSS region transcription start site region 23618
Tssr23619 2 33887435 to 33887515 80 - TSS region transcription start site region 23619
Tssr23620 2 33887553 to 33887586 33 - TSS region transcription start site region 23620
Tssr23621 2 33887718 to 33887727 9 - TSS region transcription start site region 23621
Tssr23622 2 33887862 to 33887877 15 - TSS region transcription start site region 23622
Gm39792 2 33898117 to 33908399 10282 - lncRNA gene predicted gene, 39792
D2Mit203 2 33899954 to 33900102 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 203
Tssr17400 2 33908671 to 33908686 15 + TSS region transcription start site region 17400
Tssr23623 2 33913708 to 33913739 31 - TSS region transcription start site region 23623
Gm39793 2 33928640 to 33962519 33879 - lncRNA gene predicted gene, 39793
Gm13403 2 33935788 to 33942145 6357 - lincRNA gene predicted gene 13403
Tssr23624 2 33942125 to 33942151 26 - TSS region transcription start site region 23624
D2Mit87 2 33942504 to 33942614 110 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 87
Cpgi11550 2 33966461 to 33966961 500 CpG island CpG island 11550
D2Mit239 2 33967639 to 33967769 130 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 239
Gm13404 2 33978246 to 33980324 2078 + lincRNA gene predicted gene 13404
C230014O12Rik 2 34018289 to 34107735 89446 - lincRNA gene RIKEN cDNA C230014O12 gene
D2Mit236 2 34074877 to 34075071 194 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 236
Gm38389 2 34097397 to 34111444 14047 - lincRNA gene predicted gene, 38389
D2Dcr48 2 34121026 to 34121127 101 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 48
D2Mit238 2 34121050 to 34121183 133 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 238
D2Mit202 2 34165700 to 34165836 136 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 202
Pbx3 2 34171457 to 34372045 200588 - protein coding gene pre B cell leukemia homeobox 3
Tssr23625 2 34255470 to 34255473 3 - TSS region transcription start site region 23625
Tssr23626 2 34262887 to 34262890 3 - TSS region transcription start site region 23626
Tssr23627 2 34278316 to 34278320 4 - TSS region transcription start site region 23627
C79798 2 34287771 to 34304440 16669 + antisense lncRNA gene expressed sequence C79798
Tssr23628 2 34291409 to 34291413 4 - TSS region transcription start site region 23628
Tssr23629 2 34311149 to 34311155 6 - TSS region transcription start site region 23629
Tssr23630 2 34322867 to 34322872 5 - TSS region transcription start site region 23630
Tssr23631 2 34326683 to 34326692 9 - TSS region transcription start site region 23631