Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:33271380-33591408

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ralgps1 2 33133417 to 33371486 238069 - protein coding gene Ral GEF with PH domain and SH3 binding motif 1
Tssr23594 2 33304840 to 33304847 7 - TSS region transcription start site region 23594
Gm13537 2 33323171 to 33323437 266 + pseudogene predicted gene 13537
Tssr23595 2 33336902 to 33336909 7 - TSS region transcription start site region 23595
Tssr23596 2 33353587 to 33353608 21 - TSS region transcription start site region 23596
Tssr472 2 33353625 to 33353636 11 - TSS region transcription start site region 472
Gm25998 2 33362994 to 33363046 52 - miRNA gene predicted gene, 25998
Cpgi11537 2 33370652 to 33371790 1138 CpG island CpG island 11537
Tssr23597 2 33371382 to 33371389 7 - TSS region transcription start site region 23597
Tssr23598 2 33371400 to 33371484 84 - TSS region transcription start site region 23598
Tssr23599 2 33371486 to 33371499 13 - TSS region transcription start site region 23599
Zbtb34 2 33406108 to 33431324 25216 - protein coding gene zinc finger and BTB domain containing 34
Cpgi11538 2 33430492 to 33431679 1187 CpG island CpG island 11538
Tssr23600 2 33431294 to 33431347 53 - TSS region transcription start site region 23600
Tssr17388 2 33431380 to 33431408 28 + TSS region transcription start site region 17388
Tssr23601 2 33439621 to 33439665 44 - TSS region transcription start site region 23601
Tssr17389 2 33446764 to 33446777 13 + TSS region transcription start site region 17389
Gm13536 2 33446802 to 33449207 2405 + antisense lncRNA gene predicted gene 13536
Zbtb43 2 33450287 to 33468559 18272 - protein coding gene zinc finger and BTB domain containing 43
Cpgi11539 2 33467598 to 33468774 1176 CpG island CpG island 11539
Tssr17390 2 33468087 to 33468115 28 + TSS region transcription start site region 17390
Tssr23602 2 33468493 to 33468572 79 - TSS region transcription start site region 23602
Gm13530 2 33489782 to 33503632 13850 + lincRNA gene predicted gene 13530
Gm33642 2 33512290 to 33544499 32209 - lncRNA gene predicted gene, 33642
Cpgi11540 2 33543701 to 33544780 1079 CpG island CpG island 11540
Gm39789 2 33552283 to 33555511 3228 - lncRNA gene predicted gene, 39789
Lmx1b 2 33560965 to 33640511 79546 - protein coding gene LIM homeobox transcription factor 1 beta
Cpgi11541 2 33568979 to 33569362 383 CpG island CpG island 11541
Cpgi11542 2 33580576 to 33581212 636 CpG island CpG island 11542