Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:32706567-32796583

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdk9 2 32705782 to 32712784 7002 - protein coding gene cyclin-dependent kinase 9 (CDC2-related kinase)
Cpgi11523 2 32711999 to 32713870 1871 CpG island CpG island 11523
Tssr23534 2 32712234 to 32712276 42 - TSS region transcription start site region 23534
Tssr23535 2 32712728 to 32712793 65 - TSS region transcription start site region 23535
Mir2861 2 32712807 to 32712888 81 - miRNA gene microRNA 2861
Mir3960 2 32712900 to 32712972 72 - miRNA gene microRNA 3960
Tssr23536 2 32713042 to 32713062 20 - TSS region transcription start site region 23536
Tssr23537 2 32713065 to 32713091 26 - TSS region transcription start site region 23537
Tssr23538 2 32713220 to 32713251 31 - TSS region transcription start site region 23538
Tssr468 2 32713475 to 32713488 13 + TSS region transcription start site region 468
Gm33457 2 32713550 to 32720787 7237 + lncRNA gene predicted gene, 33457
Tssr23539 2 32713553 to 32713577 24 - TSS region transcription start site region 23539
Tssr23540 2 32714486 to 32714525 39 - TSS region transcription start site region 23540
Tssr23541 2 32714923 to 32714942 19 - TSS region transcription start site region 23541
Tssr23542 2 32714952 to 32714957 5 - TSS region transcription start site region 23542
Tssr17342 2 32715089 to 32715112 23 + TSS region transcription start site region 17342
Tssr469 2 32715391 to 32715401 10 + TSS region transcription start site region 469
Tssr17343 2 32715415 to 32715427 12 + TSS region transcription start site region 17343
Tssr23543 2 32716662 to 32716665 3 - TSS region transcription start site region 23543
Tssr23544 2 32716682 to 32716687 5 - TSS region transcription start site region 23544
Tssr23545 2 32716689 to 32716704 15 - TSS region transcription start site region 23545
Tssr23546 2 32716738 to 32716759 21 - TSS region transcription start site region 23546
Tssr23547 2 32716769 to 32716778 9 - TSS region transcription start site region 23547
Tssr17344 2 32719561 to 32719609 48 + TSS region transcription start site region 17344
Sh2d3c 2 32721055 to 32755007 33952 + protein coding gene SH2 domain containing 3C
Tssr17345 2 32721080 to 32721108 28 + TSS region transcription start site region 17345
Tssr17346 2 32721109 to 32721140 31 + TSS region transcription start site region 17346
Cpgi11524 2 32727608 to 32727789 181 CpG island CpG island 11524
Tssr17347 2 32727682 to 32727712 30 + TSS region transcription start site region 17347
6330409D20Rik 2 32732620 to 32741016 8396 - protein coding gene RIKEN cDNA 6330409D20 gene
Tssr17348 2 32737358 to 32737389 31 + TSS region transcription start site region 17348
Cpgi11525 2 32741207 to 32742594 1387 CpG island CpG island 11525
Tssr17349 2 32741438 to 32741447 9 + TSS region transcription start site region 17349
Tssr17350 2 32741452 to 32741499 47 + TSS region transcription start site region 17350
Tssr23548 2 32742402 to 32742410 8 - TSS region transcription start site region 23548
Cpgi11526 2 32751029 to 32751683 654 CpG island CpG island 11526
Tssr17351 2 32751567 to 32751583 16 + TSS region transcription start site region 17351
Ttc16 2 32757026 to 32775633 18607 - protein coding gene tetratricopeptide repeat domain 16
Cpgi11527 2 32757033 to 32757867 834 CpG island CpG island 11527
Tor2a 2 32757234 to 32762244 5010 + protein coding gene torsin family 2, member A
Tssr17352 2 32757237 to 32757299 62 + TSS region transcription start site region 17352
Tssr23549 2 32771959 to 32771974 15 - TSS region transcription start site region 23549
Tssr23550 2 32775357 to 32775377 20 - TSS region transcription start site region 23550
Cpgi11528 2 32775376 to 32776592 1216 CpG island CpG island 11528
Tssr23551 2 32775378 to 32775398 20 - TSS region transcription start site region 23551
Tssr23552 2 32775405 to 32775413 8 - TSS region transcription start site region 23552
Tssr23553 2 32775595 to 32775619 24 - TSS region transcription start site region 23553
Tssr23554 2 32775625 to 32775649 24 - TSS region transcription start site region 23554
Tssr17353 2 32775769 to 32775791 22 + TSS region transcription start site region 17353
Ptrh1 2 32775786 to 32777597 1811 + protein coding gene peptidyl-tRNA hydrolase 1 homolog
Tssr17354 2 32775808 to 32775829 21 + TSS region transcription start site region 17354
Tssr17355 2 32775841 to 32775851 10 + TSS region transcription start site region 17355
Cfap157 2 32777413 to 32784405 6992 - protein coding gene cilia and flagella associated protein 157
Tssr23555 2 32784424 to 32784446 22 - TSS region transcription start site region 23555
Stxbp1 2 32787607 to 32847237 59630 - protein coding gene syntaxin binding protein 1
Tssr23556 2 32788285 to 32788294 9 - TSS region transcription start site region 23556
Tssr23557 2 32788328 to 32788348 20 - TSS region transcription start site region 23557
Tssr23558 2 32788420 to 32788443 23 - TSS region transcription start site region 23558
Tssr23559 2 32788710 to 32788731 21 - TSS region transcription start site region 23559
Tssr23560 2 32788732 to 32788767 35 - TSS region transcription start site region 23560
Tssr23561 2 32789465 to 32789474 9 - TSS region transcription start site region 23561
Tssr23562 2 32789498 to 32789508 10 - TSS region transcription start site region 23562
Tssr23563 2 32789522 to 32789543 21 - TSS region transcription start site region 23563
Tssr23564 2 32796079 to 32796091 12 - TSS region transcription start site region 23564