Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:32454728-32616320

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Naif1 2 32450457 to 32455476 5019 + protein coding gene nuclear apoptosis inducing factor 1
Tssr17286 2 32456090 to 32456103 13 + TSS region transcription start site region 17286
Gm37169 2 32487988 to 32492148 4160 + unclassified gene predicted gene, 37169
Tssr465 2 32493400 to 32493407 7 - TSS region transcription start site region 465
Tssr23525 2 32493415 to 32493438 23 - TSS region transcription start site region 23525
Tssr17287 2 32493518 to 32493559 41 + TSS region transcription start site region 17287
Tssr17288 2 32493616 to 32493622 6 + TSS region transcription start site region 17288
Tssr17289 2 32493631 to 32493647 16 + TSS region transcription start site region 17289
Tssr17290 2 32493664 to 32493673 9 + TSS region transcription start site region 17290
Tssr23526 2 32495300 to 32495324 24 - TSS region transcription start site region 23526
Cpgi11511 2 32495530 to 32495692 162 CpG island CpG island 11511
D2Mit179 2 32496986 to 32497127 141 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 179
Tssr17291 2 32525013 to 32525037 24 + TSS region transcription start site region 17291
Gm13412 2 32525031 to 32527990 2959 + lincRNA gene predicted gene 13412
Tssr17292 2 32534586 to 32534602 16 + TSS region transcription start site region 17292
Cpgi11512 2 32534728 to 32536320 1592 CpG island CpG island 11512
Tssr17293 2 32535282 to 32535290 8 + TSS region transcription start site region 17293
Tssr17294 2 32535315 to 32535347 32 + TSS region transcription start site region 17294
Fam102a 2 32535359 to 32569750 34391 + protein coding gene family with sequence similarity 102, member A
Tssr17295 2 32535396 to 32535405 9 + TSS region transcription start site region 17295
Tssr17296 2 32535724 to 32535739 15 + TSS region transcription start site region 17296
Tssr17297 2 32536048 to 32536055 7 + TSS region transcription start site region 17297
Tssr17298 2 32565747 to 32565775 28 + TSS region transcription start site region 17298
Tssr23527 2 32567632 to 32567669 37 - TSS region transcription start site region 23527
Tssr17299 2 32567730 to 32567770 40 + TSS region transcription start site region 17299
Tssr23528 2 32567741 to 32567751 10 - TSS region transcription start site region 23528
Tssr17300 2 32567799 to 32567811 12 + TSS region transcription start site region 17300
Tssr17301 2 32567932 to 32567945 13 + TSS region transcription start site region 17301
Cpgi11513 2 32570699 to 32571274 575 CpG island CpG island 11513
Tssr17302 2 32570839 to 32570852 13 + TSS region transcription start site region 17302
Dpm2 2 32570858 to 32573571 2713 + protein coding gene dolichol-phosphate (beta-D) mannosyltransferase 2
Tssr17303 2 32570861 to 32570913 52 + TSS region transcription start site region 17303
Tssr17304 2 32572336 to 32572362 26 + TSS region transcription start site region 17304
9430097D07Rik 2 32574183 to 32575605 1422 - unclassified gene RIKEN cDNA 9430097D07 gene
Pip5kl1 2 32575163 to 32583782 8619 + protein coding gene phosphatidylinositol-4-phosphate 5-kinase-like 1
Cpgi11514 2 32575296 to 32576018 722 CpG island CpG island 11514
Tssr17305 2 32575836 to 32575848 12 + TSS region transcription start site region 17305
Tssr23529 2 32576260 to 32576265 5 - TSS region transcription start site region 23529
Tssr17306 2 32576399 to 32576403 4 + TSS region transcription start site region 17306
Cpgi11515 2 32583226 to 32583652 426 CpG island CpG island 11515
Cpgi11516 2 32586869 to 32587486 617 CpG island CpG island 11516
Tssr466 2 32587049 to 32587056 7 + TSS region transcription start site region 466
Tssr17307 2 32587057 to 32587123 66 + TSS region transcription start site region 17307
St6galnac4 2 32587095 to 32599698 12603 + protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
Tssr17308 2 32587159 to 32587176 17 + TSS region transcription start site region 17308
Tssr17309 2 32587280 to 32587310 30 + TSS region transcription start site region 17309
Gm23369 2 32593469 to 32593573 104 - snRNA gene predicted gene, 23369
Cpgi11517 2 32597004 to 32597281 277 CpG island CpG island 11517
Tssr17310 2 32599698 to 32599726 28 + TSS region transcription start site region 17310
St6galnac6 2 32599709 to 32620806 21097 + protein coding gene ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
Cpgi11518 2 32606748 to 32608385 1637 CpG island CpG island 11518
Tssr17311 2 32606946 to 32606973 27 + TSS region transcription start site region 17311
Tssr17312 2 32606979 to 32607057 78 + TSS region transcription start site region 17312
Tssr467 2 32608664 to 32608686 22 + TSS region transcription start site region 467
Tssr17313 2 32608704 to 32608717 13 + TSS region transcription start site region 17313
Tssr17314 2 32608985 to 32609033 48 + TSS region transcription start site region 17314
Tssr17315 2 32609047 to 32609084 37 + TSS region transcription start site region 17315
Cpgi11519 2 32612270 to 32612606 336 CpG island CpG island 11519
Cpgi11520 2 32615023 to 32615208 185 CpG island CpG island 11520
Tssr17316 2 32616171 to 32616174 3 + TSS region transcription start site region 17316