Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:32198816-32368075

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67 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prrc2b 2 32151148 to 32234537 83389 + protein coding gene proline-rich coiled-coil 2B
Gm22192 2 32221970 to 32222054 84 + snoRNA gene predicted gene, 22192
Tssr17253 2 32225036 to 32225046 10 + TSS region transcription start site region 17253
Gm25632 2 32225653 to 32225737 84 + snoRNA gene predicted gene, 25632
E030004H24Rik 2 32227327 to 32228523 1196 unclassified gene RIKEN cDNA E030004H24 gene
Gm13610 2 32232782 to 32236382 3600 - antisense lncRNA gene predicted gene 13610
Cpgi11499 2 32236183 to 32237036 853 CpG island CpG island 11499
Tssr23466 2 32236351 to 32236363 12 - TSS region transcription start site region 23466
Tssr23467 2 32236365 to 32236373 8 - TSS region transcription start site region 23467
Tssr23468 2 32236377 to 32236393 16 - TSS region transcription start site region 23468
Tssr17254 2 32236579 to 32236595 16 + TSS region transcription start site region 17254
Pomt1 2 32236595 to 32255005 18410 + protein coding gene protein-O-mannosyltransferase 1
Tssr17255 2 32236601 to 32236622 21 + TSS region transcription start site region 17255
Tssr17256 2 32236631 to 32236701 70 + TSS region transcription start site region 17256
Tssr17257 2 32237297 to 32237340 43 + TSS region transcription start site region 17257
Uck1 2 32255002 to 32260159 5157 - protein coding gene uridine-cytidine kinase 1
Cpgi11500 2 32259715 to 32260536 821 CpG island CpG island 11500
Tssr23469 2 32260044 to 32260053 9 - TSS region transcription start site region 23469
Tssr23470 2 32260057 to 32260114 57 - TSS region transcription start site region 23470
Tssr23471 2 32260138 to 32260152 14 - TSS region transcription start site region 23471
Gm13611 2 32271845 to 32272162 317 + pseudogene predicted gene 13611
Tssr17258 2 32278811 to 32278820 9 + TSS region transcription start site region 17258
Swi5 2 32278816 to 32288075 9259 - protein coding gene SWI5 recombination repair homolog (yeast)
Cpgi11501 2 32287384 to 32288719 1335 CpG island CpG island 11501
Tssr23472 2 32287985 to 32287996 11 - TSS region transcription start site region 23472
Tssr23473 2 32288001 to 32288017 16 - TSS region transcription start site region 23473
Tssr23474 2 32288022 to 32288042 20 - TSS region transcription start site region 23474
Golga2 2 32288150 to 32307921 19771 + protein coding gene golgi autoantigen, golgin subfamily a, 2
Tssr17259 2 32288244 to 32288256 12 + TSS region transcription start site region 17259
Tssr17260 2 32288277 to 32288294 17 + TSS region transcription start site region 17260
Tssr17261 2 32288317 to 32288353 36 + TSS region transcription start site region 17261
Tssr23475 2 32288712 to 32288729 17 - TSS region transcription start site region 23475
Cpgi11502 2 32288732 to 32288936 204 CpG island CpG island 11502
D2Mit121 2 32290657 to 32290755 98 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 121
Dnm1 2 32308471 to 32353338 44867 - protein coding gene dynamin 1
Tssr23476 2 32309012 to 32309021 9 - TSS region transcription start site region 23476
Cpgi11503 2 32311645 to 32313021 1376 CpG island CpG island 11503
Tssr23477 2 32312162 to 32312202 40 - TSS region transcription start site region 23477
Tssr23478 2 32312338 to 32312387 49 - TSS region transcription start site region 23478
Tssr23479 2 32315031 to 32315049 18 - TSS region transcription start site region 23479
Gm23363 2 32318265 to 32318343 78 + miRNA gene predicted gene, 23363
Mir199b 2 32318460 to 32318569 109 + miRNA gene microRNA 199b
Tssr23480 2 32319395 to 32319399 4 - TSS region transcription start site region 23480
Tssr23481 2 32323444 to 32323455 11 - TSS region transcription start site region 23481
Tssr23482 2 32323463 to 32323492 29 - TSS region transcription start site region 23482
D2Mit84 2 32325129 to 32325329 200 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 84
Tssr23483 2 32331892 to 32331902 10 - TSS region transcription start site region 23483
Tssr23484 2 32332004 to 32332008 4 - TSS region transcription start site region 23484
Tssr23485 2 32332109 to 32332125 16 - TSS region transcription start site region 23485
Tssr23486 2 32337801 to 32337819 18 - TSS region transcription start site region 23486
Tssr23487 2 32338029 to 32338040 11 - TSS region transcription start site region 23487
Tssr23488 2 32338045 to 32338066 21 - TSS region transcription start site region 23488
Tssr23489 2 32338073 to 32338085 12 - TSS region transcription start site region 23489
Cpgi11504 2 32348542 to 32348738 196 CpG island CpG island 11504
Tssr23490 2 32349606 to 32349615 9 - TSS region transcription start site region 23490
Cpgi11505 2 32352200 to 32353652 1452 CpG island CpG island 11505
Tssr23491 2 32353251 to 32353282 31 - TSS region transcription start site region 23491
Tssr23492 2 32353283 to 32353311 28 - TSS region transcription start site region 23492
Tssr23493 2 32353312 to 32353324 12 - TSS region transcription start site region 23493
Gm39787 2 32355759 to 32357691 1932 + lncRNA gene predicted gene, 39787
Cpgi11506 2 32361473 to 32361755 282 CpG island CpG island 11506
Cpgi11507 2 32362514 to 32363726 1212 CpG island CpG island 11507
Tssr17262 2 32363004 to 32363142 138 + TSS region transcription start site region 17262
Ciz1 2 32363005 to 32378313 15308 + protein coding gene CDKN1A interacting zinc finger protein 1
Tssr17263 2 32363168 to 32363177 9 + TSS region transcription start site region 17263
Tssr17264 2 32363192 to 32363262 70 + TSS region transcription start site region 17264
Tssr17265 2 32363680 to 32363693 13 + TSS region transcription start site region 17265