Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:3199212-3413877

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam171a1 2 3114224 to 3227806 113582 + protein coding gene family with sequence similarity 171, member A1
D2Mit312 2 3235114 to 3235237 123 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 312
Cpgi11149 2 3283407 to 3285188 1781 CpG island CpG island 11149
Tssr15884 2 3284169 to 3284182 13 + TSS region transcription start site region 15884
Tssr15885 2 3284202 to 3284220 18 + TSS region transcription start site region 15885
Nmt2 2 3284212 to 3328877 44665 + protein coding gene N-myristoyltransferase 2
Tssr15886 2 3284232 to 3284290 58 + TSS region transcription start site region 15886
Gm22005 2 3291378 to 3291518 140 - snRNA gene predicted gene, 22005
Tssr22354 2 3291515 to 3291517 2 - TSS region transcription start site region 22354
Tssr15887 2 3327292 to 3327296 4 + TSS region transcription start site region 15887
Rpp38 2 3328949 to 3332643 3694 - protein coding gene ribonuclease P/MRP 38 subunit
Cpgi11150 2 3332179 to 3332903 724 CpG island CpG island 11150
Tssr22355 2 3332423 to 3332441 18 - TSS region transcription start site region 22355
Tssr22356 2 3332447 to 3332460 13 - TSS region transcription start site region 22356
Tssr22357 2 3332566 to 3332650 84 - TSS region transcription start site region 22357
Tssr15888 2 3333158 to 3333163 5 + TSS region transcription start site region 15888
Tssr22358 2 3335982 to 3336012 30 - TSS region transcription start site region 22358
Tssr15889 2 3336159 to 3336174 15 + TSS region transcription start site region 15889
Acbd7 2 3336168 to 3340993 4825 + protein coding gene acyl-Coenzyme A binding domain containing 7
Olah 2 3341987 to 3366569 24582 - protein coding gene oleoyl-ACP hydrolase
Gm37525 2 3351134 to 3354004 2870 - sense intronic lncRNA gene predicted gene, 37525
Tssr22359 2 3366568 to 3366571 3 - TSS region transcription start site region 22359
Tssr22360 2 3366574 to 3366587 13 - TSS region transcription start site region 22360
Tssr22361 2 3366599 to 3366613 14 - TSS region transcription start site region 22361
Gm39750 2 3403916 to 3408537 4621 - lncRNA gene predicted gene, 39750
Meig1 2 3409043 to 3422648 13605 - protein coding gene meiosis expressed gene 1
Tssr387 2 3411984 to 3412003 19 - TSS region transcription start site region 387
Carcdq3 2 28289138 to 3233903 -25055235 QTL cardiac collagen deposition QTL 3