Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:31497667-31647678

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ass1 2 31470270 to 31520670 50400 + protein coding gene argininosuccinate synthetase 1
Tssr17197 2 31510030 to 31510036 6 + TSS region transcription start site region 17197
Tssr17198 2 31510932 to 31510937 5 + TSS region transcription start site region 17198
Tssr17199 2 31511051 to 31511068 17 + TSS region transcription start site region 17199
Tssr17200 2 31511078 to 31511089 11 + TSS region transcription start site region 17200
Tssr17201 2 31515729 to 31515764 35 + TSS region transcription start site region 17201
Tssr17202 2 31518706 to 31518741 35 + TSS region transcription start site region 17202
Gm32952 2 31527876 to 31552067 24191 - lncRNA gene predicted gene, 32952
D2Jpk4 2 31547190 to 31547374 184 DNA segment DNA segment, Chr 2, Japan, Kominami 4
Gm13426 2 31551901 to 31552695 794 - pseudogene predicted gene 13426
Cpgi11474 2 31572277 to 31573249 972 CpG island CpG island 11474
Tssr17203 2 31572647 to 31572658 11 + TSS region transcription start site region 17203
Fubp3 2 31572651 to 31617526 44875 + protein coding gene far upstream element (FUSE) binding protein 3
Tssr17204 2 31572667 to 31572678 11 + TSS region transcription start site region 17204
Tssr17205 2 31572701 to 31572724 23 + TSS region transcription start site region 17205
Tssr17206 2 31572775 to 31572841 66 + TSS region transcription start site region 17206
Mir6998 2 31612421 to 31612484 63 + miRNA gene microRNA 6998
Tssr17207 2 31615514 to 31615538 24 + TSS region transcription start site region 17207
Tssr17208 2 31616595 to 31616599 4 + TSS region transcription start site region 17208
Gm13425 2 31633453 to 31640589 7136 - antisense lncRNA gene predicted gene 13425
Cpgi11475 2 31635127 to 31637355 2228 CpG island CpG island 11475
Tssr23443 2 31635906 to 31635907 1 - TSS region transcription start site region 23443
Cpgi11476 2 31637559 to 31638479 920 CpG island CpG island 11476
Cpgi11477 2 31638929 to 31640869 1940 CpG island CpG island 11477
Tssr17209 2 31639717 to 31639723 6 + TSS region transcription start site region 17209
Prdm12 2 31640037 to 31655795 15758 + protein coding gene PR domain containing 12
Cpgi11478 2 31641159 to 31641366 207 CpG island CpG island 11478
D2Mit268 2 31641472 to 31641621 149 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 268
Cpgi11479 2 31641816 to 31642342 526 CpG island CpG island 11479