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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:31145823-31395989

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D330023K18Rik	2	31151049 to 31152291	1242	-	lncRNA gene	RIKEN cDNA D330023K18 gene
Cpgi11466	2	31152000 to 31152789	789		CpG island	CpG island 11466
Tssr23433	2	31152234 to 31152284	50	-	TSS region	transcription start site region 23433
Gpr107	2	31152316 to 31216567	64251	+	protein coding gene	G protein-coupled receptor 107
Tssr17171	2	31152318 to 31152360	42	+	TSS region	transcription start site region 17171
Tssr23434	2	31153166 to 31153172	6	-	TSS region	transcription start site region 23434
Tssr23435	2	31163526 to 31163542	16	-	TSS region	transcription start site region 23435
Tssr23436	2	31163563 to 31163571	8	-	TSS region	transcription start site region 23436
Tssr17172	2	31171949 to 31171963	14	+	TSS region	transcription start site region 17172
Gm22516	2	31189691 to 31189814	123	+	snoRNA gene	predicted gene, 22516
Gm13405	2	31209470 to 31211347	1877	-	antisense lncRNA gene	predicted gene 13405
Cpgi11467	2	31239201 to 31239663	462		CpG island	CpG island 11467
Tssr23437	2	31239481 to 31239486	5	-	TSS region	transcription start site region 23437
Cpgi11468	2	31245177 to 31247001	1824		CpG island	CpG island 11468
Tssr17173	2	31245801 to 31245900	99	+	TSS region	transcription start site region 17173
Ncs1	2	31245823 to 31295989	50166	+	protein coding gene	neuronal calcium sensor 1
Tssr17174	2	31245905 to 31245916	11	+	TSS region	transcription start site region 17174
Tssr17175	2	31246042 to 31246055	13	+	TSS region	transcription start site region 17175
Tssr17176	2	31246069 to 31246120	51	+	TSS region	transcription start site region 17176
Tssr17177	2	31278033 to 31278044	11	+	TSS region	transcription start site region 17177
Tssr17178	2	31284144 to 31284157	13	+	TSS region	transcription start site region 17178
Tssr17179	2	31293185 to 31293194	9	+	TSS region	transcription start site region 17179
Gm32866	2	31307613 to 31314488	6875	-	lncRNA gene	predicted gene, 32866
Cfq6	2	31313023 to 44618192	13305169		QTL	conditioned fear QTL 6
Cpgi11469	2	31313962 to 31315034	1072		CpG island	CpG island 11469
Tssr17180	2	31314278 to 31314287	9	+	TSS region	transcription start site region 17180
Tssr17181	2	31314303 to 31314376	73	+	TSS region	transcription start site region 17181
Hmcn2	2	31314415 to 31460738	146323	+	protein coding gene	hemicentin 2
D2Mit296	2	31324555 to 31324701	146		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 296
Sbmd2	2	31324555 to 31324701	146		QTL	spinal bone mineral density 2
D2Mit64	2	31344757 to 31344930	173		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 64
Hbnr5	2	105313225 to 31324555	-73988670		QTL	Heligmosomoides bakeri nematode resistance 5