Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:31052234-31252284

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fnbp1 2 31026206 to 31142008 115802 - protein coding gene formin binding protein 1
Tssr23426 2 31053596 to 31053608 12 - TSS region transcription start site region 23426
Tssr23427 2 31054197 to 31054209 12 - TSS region transcription start site region 23427
Tssr17166 2 31060458 to 31060473 15 + TSS region transcription start site region 17166
Cpgi11463 2 31061288 to 31061683 395 CpG island CpG island 11463
Tssr17167 2 31081710 to 31081736 26 + TSS region transcription start site region 17167
Cpgi11464 2 31082713 to 31083110 397 CpG island CpG island 11464
Tssr17168 2 31082873 to 31082876 3 + TSS region transcription start site region 17168
Tssr23428 2 31100985 to 31100995 10 - TSS region transcription start site region 23428
Tssr23429 2 31116289 to 31116320 31 - TSS region transcription start site region 23429
Tssr17169 2 31140280 to 31140286 6 + TSS region transcription start site region 17169
Cpgi11465 2 31140924 to 31142523 1599 CpG island CpG island 11465
Tssr23430 2 31141943 to 31142001 58 - TSS region transcription start site region 23430
Tssr23431 2 31142002 to 31142017 15 - TSS region transcription start site region 23431
Tssr23432 2 31142019 to 31142028 9 - TSS region transcription start site region 23432
Tssr17170 2 31143412 to 31143443 31 + TSS region transcription start site region 17170
D330023K18Rik 2 31151049 to 31152291 1242 - lncRNA gene RIKEN cDNA D330023K18 gene
Cpgi11466 2 31152000 to 31152789 789 CpG island CpG island 11466
Tssr23433 2 31152234 to 31152284 50 - TSS region transcription start site region 23433
Gpr107 2 31152316 to 31216567 64251 + protein coding gene G protein-coupled receptor 107
Tssr17171 2 31152318 to 31152360 42 + TSS region transcription start site region 17171
Tssr23434 2 31153166 to 31153172 6 - TSS region transcription start site region 23434
Tssr23435 2 31163526 to 31163542 16 - TSS region transcription start site region 23435
Tssr23436 2 31163563 to 31163571 8 - TSS region transcription start site region 23436
Tssr17172 2 31171949 to 31171963 14 + TSS region transcription start site region 17172
Gm22516 2 31189691 to 31189814 123 + snoRNA gene predicted gene, 22516
Gm13405 2 31209470 to 31211347 1877 - antisense lncRNA gene predicted gene 13405
Cpgi11467 2 31239201 to 31239663 462 CpG island CpG island 11467
Tssr23437 2 31239481 to 31239486 5 - TSS region transcription start site region 23437
Cpgi11468 2 31245177 to 31247001 1824 CpG island CpG island 11468
Tssr17173 2 31245801 to 31245900 99 + TSS region transcription start site region 17173
Ncs1 2 31245823 to 31295989 50166 + protein coding gene neuronal calcium sensor 1
Tssr17174 2 31245905 to 31245916 11 + TSS region transcription start site region 17174
Tssr17175 2 31246042 to 31246055 13 + TSS region transcription start site region 17175
Tssr17176 2 31246069 to 31246120 51 + TSS region transcription start site region 17176