Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:30962279-31042655

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tor1a 2 30960627 to 30967933 7306 - protein coding gene torsin family 1, member A (torsin A)
Tssr17157 2 30963099 to 30963149 50 + TSS region transcription start site region 17157
Tssr17158 2 30965841 to 30965845 4 + TSS region transcription start site region 17158
Cpgi11461 2 30966987 to 30968100 1113 CpG island CpG island 11461
Tssr23412 2 30967820 to 30967830 10 - TSS region transcription start site region 23412
Tssr23413 2 30967846 to 30967856 10 - TSS region transcription start site region 23413
Tssr23414 2 30967859 to 30967924 65 - TSS region transcription start site region 23414
BC005624 2 30972177 to 30982201 10024 - protein coding gene cDNA sequence BC005624
Cpgi11462 2 30981436 to 30982840 1404 CpG island CpG island 11462
Tssr23415 2 30981857 to 30981947 90 - TSS region transcription start site region 23415
Tssr17159 2 30981954 to 30981965 11 + TSS region transcription start site region 17159
Tssr17160 2 30981979 to 30981994 15 + TSS region transcription start site region 17160
Tssr23416 2 30982182 to 30982224 42 - TSS region transcription start site region 23416
Usp20 2 30982279 to 31022655 40376 + protein coding gene ubiquitin specific peptidase 20
Tssr17161 2 30982328 to 30982348 20 + TSS region transcription start site region 17161
Tssr17162 2 30982350 to 30982376 26 + TSS region transcription start site region 17162
Gm39786 2 30988250 to 30996970 8720 - lncRNA gene predicted gene, 39786
Tssr17163 2 30995539 to 30995569 30 + TSS region transcription start site region 17163
Tssr17164 2 30995671 to 30995722 51 + TSS region transcription start site region 17164
Tssr17165 2 30995731 to 30995750 19 + TSS region transcription start site region 17165
Fnbp1 2 31026206 to 31142008 115802 - protein coding gene formin binding protein 1
Tssr23417 2 31030788 to 31030803 15 - TSS region transcription start site region 23417
Tssr23418 2 31031656 to 31031660 4 - TSS region transcription start site region 23418
Tssr23419 2 31031767 to 31031779 12 - TSS region transcription start site region 23419
Tssr23420 2 31031858 to 31031862 4 - TSS region transcription start site region 23420
Tssr23421 2 31035516 to 31035551 35 - TSS region transcription start site region 23421
Tssr23422 2 31035724 to 31035772 48 - TSS region transcription start site region 23422
Tssr23423 2 31036750 to 31036765 15 - TSS region transcription start site region 23423
Tssr23424 2 31036783 to 31036794 11 - TSS region transcription start site region 23424