Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:30861436-31102840

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prrx2 2 30845064 to 30881251 36187 + protein coding gene paired related homeobox 2
Cpgi11458 2 30864608 to 30865283 675 CpG island CpG island 11458
Ptges 2 30889471 to 30903297 13826 - protein coding gene prostaglandin E synthase
Tssr23397 2 30890075 to 30890106 31 - TSS region transcription start site region 23397
Tssr23398 2 30897502 to 30897514 12 - TSS region transcription start site region 23398
Tssr23399 2 30897518 to 30897543 25 - TSS region transcription start site region 23399
Tssr17147 2 30901627 to 30901634 7 + TSS region transcription start site region 17147
Tssr23400 2 30903255 to 30903269 14 - TSS region transcription start site region 23400
Gm39785 2 30912085 to 30930314 18229 - lncRNA gene predicted gene, 39785
Tssr17148 2 30913365 to 30913374 9 + TSS region transcription start site region 17148
Tssr17149 2 30913416 to 30913432 16 + TSS region transcription start site region 17149
Tssr17150 2 30913460 to 30913493 33 + TSS region transcription start site region 17150
Tssr17151 2 30919514 to 30919525 11 + TSS region transcription start site region 17151
Tssr23401 2 30919655 to 30919676 21 - TSS region transcription start site region 23401
Tssr23402 2 30920280 to 30920305 25 - TSS region transcription start site region 23402
Tssr23403 2 30920376 to 30920379 3 - TSS region transcription start site region 23403
Tssr23404 2 30921906 to 30921920 14 - TSS region transcription start site region 23404
Gm13400 2 30923978 to 30924357 379 - pseudogene predicted gene 13400
Tssr23405 2 30924913 to 30924954 41 - TSS region transcription start site region 23405
Tssr17152 2 30925463 to 30925474 11 + TSS region transcription start site region 17152
Tssr17153 2 30927647 to 30927671 24 + TSS region transcription start site region 17153
Tssr23406 2 30928048 to 30928061 13 - TSS region transcription start site region 23406
Tssr23407 2 30928952 to 30928998 46 - TSS region transcription start site region 23407
Tssr17154 2 30929129 to 30929168 39 + TSS region transcription start site region 17154
Cpgi11459 2 30929647 to 30929982 335 CpG island CpG island 11459
Tssr23408 2 30929830 to 30929893 63 - TSS region transcription start site region 23408
Tssr23409 2 30929894 to 30929908 14 - TSS region transcription start site region 23409
Tssr17155 2 30930019 to 30930037 18 + TSS region transcription start site region 17155
Tssr23410 2 30930090 to 30930105 15 - TSS region transcription start site region 23410
Tssr23411 2 30932022 to 30932071 49 - TSS region transcription start site region 23411
Cpgi11460 2 30952594 to 30953506 912 CpG island CpG island 11460
Tssr17156 2 30952955 to 30953016 61 + TSS region transcription start site region 17156
Tor1b 2 30952959 to 30959015 6056 + protein coding gene torsin family 1, member B
Tor1a 2 30960627 to 30967933 7306 - protein coding gene torsin family 1, member A (torsin A)
Tssr17157 2 30963099 to 30963149 50 + TSS region transcription start site region 17157
Tssr17158 2 30965841 to 30965845 4 + TSS region transcription start site region 17158
Cpgi11461 2 30966987 to 30968100 1113 CpG island CpG island 11461
Tssr23412 2 30967820 to 30967830 10 - TSS region transcription start site region 23412
Tssr23413 2 30967846 to 30967856 10 - TSS region transcription start site region 23413
Tssr23414 2 30967859 to 30967924 65 - TSS region transcription start site region 23414
BC005624 2 30972177 to 30982201 10024 - protein coding gene cDNA sequence BC005624
Cpgi11462 2 30981436 to 30982840 1404 CpG island CpG island 11462
Tssr23415 2 30981857 to 30981947 90 - TSS region transcription start site region 23415
Tssr17159 2 30981954 to 30981965 11 + TSS region transcription start site region 17159
Tssr17160 2 30981979 to 30981994 15 + TSS region transcription start site region 17160
Tssr23416 2 30982182 to 30982224 42 - TSS region transcription start site region 23416
Usp20 2 30982279 to 31022655 40376 + protein coding gene ubiquitin specific peptidase 20
Tssr17161 2 30982328 to 30982348 20 + TSS region transcription start site region 17161
Tssr17162 2 30982350 to 30982376 26 + TSS region transcription start site region 17162
Gm39786 2 30988250 to 30996970 8720 - lncRNA gene predicted gene, 39786
Tssr17163 2 30995539 to 30995569 30 + TSS region transcription start site region 17163
Tssr17164 2 30995671 to 30995722 51 + TSS region transcription start site region 17164
Tssr17165 2 30995731 to 30995750 19 + TSS region transcription start site region 17165
Fnbp1 2 31026206 to 31142008 115802 - protein coding gene formin binding protein 1
Tssr23417 2 31030788 to 31030803 15 - TSS region transcription start site region 23417
Tssr23418 2 31031656 to 31031660 4 - TSS region transcription start site region 23418
Tssr23419 2 31031767 to 31031779 12 - TSS region transcription start site region 23419
Tssr23420 2 31031858 to 31031862 4 - TSS region transcription start site region 23420
Tssr23421 2 31035516 to 31035551 35 - TSS region transcription start site region 23421
Tssr23422 2 31035724 to 31035772 48 - TSS region transcription start site region 23422
Tssr23423 2 31036750 to 31036765 15 - TSS region transcription start site region 23423
Tssr23424 2 31036783 to 31036794 11 - TSS region transcription start site region 23424
Tssr23425 2 31051181 to 31051198 17 - TSS region transcription start site region 23425
Tssr23426 2 31053596 to 31053608 12 - TSS region transcription start site region 23426
Tssr23427 2 31054197 to 31054209 12 - TSS region transcription start site region 23427
Tssr17166 2 31060458 to 31060473 15 + TSS region transcription start site region 17166
Cpgi11463 2 31061288 to 31061683 395 CpG island CpG island 11463
Tssr17167 2 31081710 to 31081736 26 + TSS region transcription start site region 17167
Cpgi11464 2 31082713 to 31083110 397 CpG island CpG island 11464
Tssr17168 2 31082873 to 31082876 3 + TSS region transcription start site region 17168
Tssr23428 2 31100985 to 31100995 10 - TSS region transcription start site region 23428