Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:30775337-30915353

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39783 2 30771515 to 30783618 12103 + lncRNA gene predicted gene, 39783
Gm39784 2 30783661 to 30787232 3571 - lncRNA gene predicted gene, 39784
Cpgi11453 2 30794360 to 30795033 673 CpG island CpG island 11453
1700001O22Rik 2 30795563 to 30803723 8160 - protein coding gene RIKEN cDNA 1700001O22 gene
Tssr23389 2 30796631 to 30796639 8 - TSS region transcription start site region 23389
Tssr23390 2 30796673 to 30796700 27 - TSS region transcription start site region 23390
Cpgi11454 2 30800844 to 30801944 1100 CpG island CpG island 11454
Tssr23391 2 30801698 to 30801742 44 - TSS region transcription start site region 23391
Tssr23392 2 30803625 to 30803673 48 - TSS region transcription start site region 23392
Tssr17136 2 30803775 to 30803783 8 + TSS region transcription start site region 17136
Tssr17137 2 30803785 to 30803796 11 + TSS region transcription start site region 17137
4930527E20Rik 2 30803793 to 30807429 3636 + antisense lncRNA gene RIKEN cDNA 4930527E20 gene
Cpgi11455 2 30807306 to 30808449 1143 CpG island CpG island 11455
Tssr17138 2 30807370 to 30807391 21 + TSS region transcription start site region 17138
Tssr23393 2 30807535 to 30807574 39 - TSS region transcription start site region 23393
Ntmt1 2 30807826 to 30823033 15207 + protein coding gene N-terminal Xaa-Pro-Lys N-methyltransferase 1
Tssr17139 2 30807928 to 30807999 71 + TSS region transcription start site region 17139
Asb6 2 30823097 to 30828300 5203 - protein coding gene ankyrin repeat and SOCS box-containing 6
Cpgi11456 2 30827506 to 30828650 1144 CpG island CpG island 11456
Tssr23394 2 30828182 to 30828194 12 - TSS region transcription start site region 23394
Tssr23395 2 30828201 to 30828219 18 - TSS region transcription start site region 23395
Tssr23396 2 30828228 to 30828311 83 - TSS region transcription start site region 23396
Cpgi11457 2 30844688 to 30846296 1608 CpG island CpG island 11457
Prrx2 2 30845064 to 30881251 36187 + protein coding gene paired related homeobox 2
Tssr17140 2 30845268 to 30845304 36 + TSS region transcription start site region 17140
Tssr17141 2 30845310 to 30845323 13 + TSS region transcription start site region 17141
Tssr17142 2 30845337 to 30845353 16 + TSS region transcription start site region 17142
Tssr17143 2 30845361 to 30845396 35 + TSS region transcription start site region 17143
Tssr17144 2 30845463 to 30845464 1 + TSS region transcription start site region 17144
Tssr17145 2 30845483 to 30845508 25 + TSS region transcription start site region 17145
Tssr17146 2 30845536 to 30845541 5 + TSS region transcription start site region 17146
Cpgi11458 2 30864608 to 30865283 675 CpG island CpG island 11458
Ptges 2 30889471 to 30903297 13826 - protein coding gene prostaglandin E synthase
Tssr23397 2 30890075 to 30890106 31 - TSS region transcription start site region 23397
Tssr23398 2 30897502 to 30897514 12 - TSS region transcription start site region 23398
Tssr23399 2 30897518 to 30897543 25 - TSS region transcription start site region 23399
Tssr17147 2 30901627 to 30901634 7 + TSS region transcription start site region 17147
Tssr23400 2 30903255 to 30903269 14 - TSS region transcription start site region 23400
Gm39785 2 30912085 to 30930314 18229 - lncRNA gene predicted gene, 39785
Tssr17148 2 30913365 to 30913374 9 + TSS region transcription start site region 17148
Tssr17149 2 30913416 to 30913432 16 + TSS region transcription start site region 17149
Tssr17150 2 30913460 to 30913493 33 + TSS region transcription start site region 17150