Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:30419729-30654022

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptpa 2 30416050 to 30447807 31757 + protein coding gene protein phosphatase 2 protein activator
Tssr17120 2 30430042 to 30430047 5 + TSS region transcription start site region 17120
Tssr17121 2 30439507 to 30439534 27 + TSS region transcription start site region 17121
Tssr17122 2 30441831 to 30441836 5 + TSS region transcription start site region 17122
Tssr17123 2 30441919 to 30441949 30 + TSS region transcription start site region 17123
Tssr17124 2 30441978 to 30442004 26 + TSS region transcription start site region 17124
Tssr17125 2 30442063 to 30442078 15 + TSS region transcription start site region 17125
Tssr17126 2 30445634 to 30445647 13 + TSS region transcription start site region 17126
Tssr17127 2 30466379 to 30466384 5 + TSS region transcription start site region 17127
Tssr458 2 30469220 to 30469222 2 - TSS region transcription start site region 458
Cpgi11437 2 30469670 to 30470901 1231 CpG island CpG island 11437
Cpgi11438 2 30472332 to 30474845 2513 CpG island CpG island 11438
Ier5l 2 30472631 to 30474199 1568 - protein coding gene immediate early response 5-like
Tssr23382 2 30473474 to 30473521 47 - TSS region transcription start site region 23382
Tssr23383 2 30474212 to 30474222 10 - TSS region transcription start site region 23383
Gm31291 2 30475447 to 30489052 13605 + lncRNA gene predicted gene, 31291
Gm39781 2 30497826 to 30502128 4302 + lncRNA gene predicted gene, 39781
Gm14487 2 30534729 to 30539022 4293 + lincRNA gene predicted gene 14487
Gm31585 2 30544429 to 30547844 3415 + lncRNA gene predicted gene, 31585
Cpgi11439 2 30545038 to 30545552 514 CpG island CpG island 11439
Tssr23384 2 30556582 to 30556617 35 - TSS region transcription start site region 23384
Cpgi11440 2 30594595 to 30594836 241 CpG island CpG island 11440
Tssr23385 2 30594901 to 30594917 16 - TSS region transcription start site region 23385
Tssr17128 2 30595037 to 30595048 11 + TSS region transcription start site region 17128
Cstad 2 30595044 to 30608945 13901 + protein coding gene CSA-conditional, T cell activation-dependent protein
Cpgi11441 2 30595189 to 30595342 153 CpG island CpG island 11441
D2Mit33 2 30602309 to 30602488 179 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 33
D2Dcr46 2 30602347 to 30602475 128 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 46
Cpgi11442 2 30604978 to 30605135 157 CpG island CpG island 11442
9330198N18Rik 2 30629210 to 30643463 14253 + lincRNA gene RIKEN cDNA 9330198N18 gene
Tssr23386 2 30629891 to 30629895 4 - TSS region transcription start site region 23386
Tssr17129 2 30636549 to 30636562 13 + TSS region transcription start site region 17129
Gm32316 2 30647544 to 30655643 8099 - lncRNA gene predicted gene, 32316