Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:29933863-30103867

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11419 2 29935167 to 29935964 797 CpG island CpG island 11419
Gle1 2 29935409 to 29959432 24023 + protein coding gene GLE1 RNA export mediator (yeast)
Tssr17052 2 29935413 to 29935499 86 + TSS region transcription start site region 17052
Gm39779 2 29962174 to 29965035 2861 + lncRNA gene predicted gene, 39779
Tssr17053 2 29963424 to 29963428 4 + TSS region transcription start site region 17053
Cpgi11420 2 29965165 to 29966224 1059 CpG island CpG island 11420
Tssr17054 2 29965315 to 29965328 13 + TSS region transcription start site region 17054
Sptan1 2 29965560 to 30031451 65891 + protein coding gene spectrin alpha, non-erythrocytic 1
Tssr17055 2 29965669 to 29965688 19 + TSS region transcription start site region 17055
Tssr17056 2 29966058 to 29966070 12 + TSS region transcription start site region 17056
Tssr17057 2 29966365 to 29966389 24 + TSS region transcription start site region 17057
Tssr17058 2 29984119 to 29984123 4 + TSS region transcription start site region 17058
Mir6997 2 29995950 to 29996020 70 + miRNA gene microRNA 6997
Tssr17059 2 29999997 to 30000012 15 + TSS region transcription start site region 17059
Tssr17060 2 30018863 to 30018867 4 + TSS region transcription start site region 17060
Tssr17061 2 30021058 to 30021062 4 + TSS region transcription start site region 17061
Wdr34 2 30031551 to 30048879 17328 - protein coding gene WD repeat domain 34
Cpgi11421 2 30048209 to 30049298 1089 CpG island CpG island 11421
Tssr23343 2 30048827 to 30048891 64 - TSS region transcription start site region 23343
2410198J08Rik 2 30048961 to 30049377 416 unclassified gene RIKEN cDNA 2410198J08 gene
Tssr17062 2 30061806 to 30061815 9 + TSS region transcription start site region 17062
Cpgi11422 2 30061816 to 30063260 1444 CpG island CpG island 11422
Tssr17063 2 30061838 to 30061841 3 + TSS region transcription start site region 17063
Tssr17064 2 30061847 to 30061859 12 + TSS region transcription start site region 17064
Tssr17065 2 30061861 to 30061864 3 + TSS region transcription start site region 17065
Tssr17066 2 30061882 to 30061891 9 + TSS region transcription start site region 17066
Tssr17067 2 30061905 to 30061912 7 + TSS region transcription start site region 17067
Tssr17068 2 30061920 to 30061929 9 + TSS region transcription start site region 17068
Tssr17069 2 30061949 to 30061965 16 + TSS region transcription start site region 17069
Set 2 30061996 to 30072577 10581 + protein coding gene SET nuclear oncogene
Tssr17070 2 30062017 to 30062043 26 + TSS region transcription start site region 17070
Tssr17071 2 30062045 to 30062078 33 + TSS region transcription start site region 17071
Tssr17072 2 30062090 to 30062098 8 + TSS region transcription start site region 17072
Tssr17073 2 30062522 to 30062545 23 + TSS region transcription start site region 17073
Tssr17074 2 30062551 to 30062570 19 + TSS region transcription start site region 17074
Tssr17075 2 30062718 to 30062732 14 + TSS region transcription start site region 17075
Cpgi11423 2 30065917 to 30067694 1777 CpG island CpG island 11423
Tssr17076 2 30066419 to 30066461 42 + TSS region transcription start site region 17076
Tssr17077 2 30066488 to 30066530 42 + TSS region transcription start site region 17077
Tssr17078 2 30066538 to 30066567 29 + TSS region transcription start site region 17078
Tssr17079 2 30066695 to 30066707 12 + TSS region transcription start site region 17079
Tssr17080 2 30066709 to 30066723 14 + TSS region transcription start site region 17080
Tssr17081 2 30066782 to 30066798 16 + TSS region transcription start site region 17081
Tssr17082 2 30066799 to 30066821 22 + TSS region transcription start site region 17082
Tssr17083 2 30066832 to 30066843 11 + TSS region transcription start site region 17083
Tssr17084 2 30067159 to 30067187 28 + TSS region transcription start site region 17084
Cpgi11424 2 30077129 to 30078160 1031 CpG island CpG island 11424
Pkn3 2 30077684 to 30091022 13338 + protein coding gene protein kinase N3
Tssr17085 2 30080432 to 30080473 41 + TSS region transcription start site region 17085
Zdhhc12 2 30090944 to 30093635 2691 - protein coding gene zinc finger, DHHC domain containing 12
Cpgi11425 2 30093299 to 30094087 788 CpG island CpG island 11425
Tssr23344 2 30093533 to 30093544 11 - TSS region transcription start site region 23344
Tssr23345 2 30093561 to 30093603 42 - TSS region transcription start site region 23345
Tssr23346 2 30093607 to 30093641 34 - TSS region transcription start site region 23346
Tssr23347 2 30093642 to 30093679 37 - TSS region transcription start site region 23347
Zer1 2 30097283 to 30124585 27302 - protein coding gene zyg-11 related, cell cycle regulator