Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:29880165-30051224

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cercam 2 29869164 to 29882840 13676 + protein coding gene cerebral endothelial cell adhesion molecule
Tssr17033 2 29881983 to 29881994 11 + TSS region transcription start site region 17033
Cpgi11418 2 29888988 to 29890932 1944 CpG island CpG island 11418
Tssr17034 2 29889199 to 29889206 7 + TSS region transcription start site region 17034
Tssr17035 2 29889217 to 29889243 26 + TSS region transcription start site region 17035
Odf2 2 29889221 to 29931746 42525 + protein coding gene outer dense fiber of sperm tails 2
Tssr452 2 29889709 to 29889716 7 + TSS region transcription start site region 452
Tssr17036 2 29889742 to 29889753 11 + TSS region transcription start site region 17036
Tssr17037 2 29889802 to 29889836 34 + TSS region transcription start site region 17037
Tssr453 2 29889988 to 29889993 5 + TSS region transcription start site region 453
Tssr454 2 29890005 to 29890016 11 + TSS region transcription start site region 454
Tssr455 2 29890038 to 29890045 7 + TSS region transcription start site region 455
Tssr17038 2 29890066 to 29890081 15 + TSS region transcription start site region 17038
Tssr17039 2 29890096 to 29890107 11 + TSS region transcription start site region 17039
Tssr456 2 29890110 to 29890114 4 + TSS region transcription start site region 456
Tssr23341 2 29890334 to 29890370 36 - TSS region transcription start site region 23341
Tssr17040 2 29890446 to 29890511 65 + TSS region transcription start site region 17040
Tssr17041 2 29890520 to 29890531 11 + TSS region transcription start site region 17041
Tssr17042 2 29890534 to 29890545 11 + TSS region transcription start site region 17042
Tssr17043 2 29890555 to 29890556 1 + TSS region transcription start site region 17043
Tssr17044 2 29890698 to 29890710 12 + TSS region transcription start site region 17044
Tssr17045 2 29890861 to 29890868 7 + TSS region transcription start site region 17045
Tssr17046 2 29891985 to 29892007 22 + TSS region transcription start site region 17046
Tssr17047 2 29893054 to 29893073 19 + TSS region transcription start site region 17047
Tssr457 2 29903308 to 29903319 11 + TSS region transcription start site region 457
Tssr17048 2 29903542 to 29903557 15 + TSS region transcription start site region 17048
Tssr17049 2 29903568 to 29903596 28 + TSS region transcription start site region 17049
Tssr17050 2 29914445 to 29914449 4 + TSS region transcription start site region 17050
Tssr23342 2 29914832 to 29914846 14 - TSS region transcription start site region 23342
Tssr17051 2 29920768 to 29920797 29 + TSS region transcription start site region 17051
Gm23865 2 29931427 to 29931523 96 - snRNA gene predicted gene, 23865
Cpgi11419 2 29935167 to 29935964 797 CpG island CpG island 11419
Gle1 2 29935409 to 29959432 24023 + protein coding gene GLE1 RNA export mediator (yeast)
Tssr17052 2 29935413 to 29935499 86 + TSS region transcription start site region 17052
Gm39779 2 29962174 to 29965035 2861 + lncRNA gene predicted gene, 39779
Tssr17053 2 29963424 to 29963428 4 + TSS region transcription start site region 17053
Cpgi11420 2 29965165 to 29966224 1059 CpG island CpG island 11420
Tssr17054 2 29965315 to 29965328 13 + TSS region transcription start site region 17054
Sptan1 2 29965560 to 30031451 65891 + protein coding gene spectrin alpha, non-erythrocytic 1
Tssr17055 2 29965669 to 29965688 19 + TSS region transcription start site region 17055
Tssr17056 2 29966058 to 29966070 12 + TSS region transcription start site region 17056
Tssr17057 2 29966365 to 29966389 24 + TSS region transcription start site region 17057
Tssr17058 2 29984119 to 29984123 4 + TSS region transcription start site region 17058
Mir6997 2 29995950 to 29996020 70 + miRNA gene microRNA 6997
Tssr17059 2 29999997 to 30000012 15 + TSS region transcription start site region 17059
Tssr17060 2 30018863 to 30018867 4 + TSS region transcription start site region 17060
Tssr17061 2 30021058 to 30021062 4 + TSS region transcription start site region 17061
Wdr34 2 30031551 to 30048879 17328 - protein coding gene WD repeat domain 34
Cpgi11421 2 30048209 to 30049298 1089 CpG island CpG island 11421
Tssr23343 2 30048827 to 30048891 64 - TSS region transcription start site region 23343
2410198J08Rik 2 30048961 to 30049377 416 unclassified gene RIKEN cDNA 2410198J08 gene