Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:29805631-29885727

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc27a4 2 29802680 to 29817522 14842 + protein coding gene solute carrier family 27 (fatty acid transporter), member 4
Tssr23336 2 29827026 to 29827044 18 - TSS region transcription start site region 23336
Cpgi11415 2 29827219 to 29827907 688 CpG island CpG island 11415
Tssr17030 2 29827368 to 29827403 35 + TSS region transcription start site region 17030
Urm1 2 29827389 to 29844996 17607 + protein coding gene ubiquitin related modifier 1
Cpgi11416 2 29845351 to 29846628 1277 CpG island CpG island 11416
Mir219a-2 2 29845631 to 29845727 96 - miRNA gene microRNA 219a-2
Tssr23337 2 29845641 to 29845645 4 - TSS region transcription start site region 23337
Mir219b 2 29845647 to 29845711 64 + miRNA gene microRNA 219b
Tssr23338 2 29846302 to 29846316 14 - TSS region transcription start site region 23338
Tssr23339 2 29846476 to 29846494 18 - TSS region transcription start site region 23339
Tssr17031 2 29858247 to 29858268 21 + TSS region transcription start site region 17031
2600006K01Rik 2 29868723 to 29870317 1594 - antisense lncRNA gene RIKEN cDNA 2600006K01 gene
Cpgi11417 2 29868951 to 29869727 776 CpG island CpG island 11417
Cercam 2 29869164 to 29882840 13676 + protein coding gene cerebral endothelial cell adhesion molecule
Tssr17032 2 29869484 to 29869535 51 + TSS region transcription start site region 17032
Tssr23340 2 29870188 to 29870223 35 - TSS region transcription start site region 23340
Tssr17033 2 29881983 to 29881994 11 + TSS region transcription start site region 17033