Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:29772368-29882403

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trub2 2 29761223 to 29787708 26485 - protein coding gene TruB pseudouridine (psi) synthase family member 2
Tssr450 2 29772549 to 29772556 7 + TSS region transcription start site region 450
Tssr17017 2 29772595 to 29772611 16 + TSS region transcription start site region 17017
Tssr23333 2 29773507 to 29773517 10 - TSS region transcription start site region 23333
Tssr23334 2 29787250 to 29787254 4 - TSS region transcription start site region 23334
Cpgi11412 2 29787377 to 29787673 296 CpG island CpG island 11412
Tssr17018 2 29787482 to 29787511 29 + TSS region transcription start site region 17018
Tssr23335 2 29787628 to 29787680 52 - TSS region transcription start site region 23335
Tssr451 2 29788120 to 29788140 20 - TSS region transcription start site region 451
Cpgi11413 2 29788154 to 29788675 521 CpG island CpG island 11413
Coq4 2 29788187 to 29797743 9556 + protein coding gene coenzyme Q4
Tssr17019 2 29788237 to 29788302 65 + TSS region transcription start site region 17019
Tssr17020 2 29788308 to 29788320 12 + TSS region transcription start site region 17020
Tssr17021 2 29788321 to 29788335 14 + TSS region transcription start site region 17021
Cpgi11414 2 29802447 to 29803301 854 CpG island CpG island 11414
Tssr17022 2 29802626 to 29802647 21 + TSS region transcription start site region 17022
Tssr17023 2 29802655 to 29802693 38 + TSS region transcription start site region 17023
Slc27a4 2 29802680 to 29817522 14842 + protein coding gene solute carrier family 27 (fatty acid transporter), member 4
Tssr17024 2 29802697 to 29802720 23 + TSS region transcription start site region 17024
Tssr17025 2 29802731 to 29802745 14 + TSS region transcription start site region 17025
Tssr17026 2 29802806 to 29802819 13 + TSS region transcription start site region 17026
Tssr17027 2 29802833 to 29802855 22 + TSS region transcription start site region 17027
Tssr17028 2 29803618 to 29803634 16 + TSS region transcription start site region 17028
Tssr17029 2 29803650 to 29803660 10 + TSS region transcription start site region 17029
Tssr23336 2 29827026 to 29827044 18 - TSS region transcription start site region 23336
Cpgi11415 2 29827219 to 29827907 688 CpG island CpG island 11415
Tssr17030 2 29827368 to 29827403 35 + TSS region transcription start site region 17030
Urm1 2 29827389 to 29844996 17607 + protein coding gene ubiquitin related modifier 1
Cpgi11416 2 29845351 to 29846628 1277 CpG island CpG island 11416
Mir219a-2 2 29845631 to 29845727 96 - miRNA gene microRNA 219a-2
Tssr23337 2 29845641 to 29845645 4 - TSS region transcription start site region 23337
Mir219b 2 29845647 to 29845711 64 + miRNA gene microRNA 219b
Tssr23338 2 29846302 to 29846316 14 - TSS region transcription start site region 23338
Tssr23339 2 29846476 to 29846494 18 - TSS region transcription start site region 23339
Tssr17031 2 29858247 to 29858268 21 + TSS region transcription start site region 17031
2600006K01Rik 2 29868723 to 29870317 1594 - antisense lncRNA gene RIKEN cDNA 2600006K01 gene
Cpgi11417 2 29868951 to 29869727 776 CpG island CpG island 11417
Cercam 2 29869164 to 29882840 13676 + protein coding gene cerebral endothelial cell adhesion molecule
Tssr17032 2 29869484 to 29869535 51 + TSS region transcription start site region 17032
Tssr23340 2 29870188 to 29870223 35 - TSS region transcription start site region 23340
Tssr17033 2 29881983 to 29881994 11 + TSS region transcription start site region 17033