Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 2:29701635-29801669

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31 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rapgef1 2 29619720 to 29740364 120644 + protein coding gene Rap guanine nucleotide exchange factor (GEF) 1
Tssr17014 2 29724027 to 29724029 2 + TSS region transcription start site region 17014
Gm9823 2 29738335 to 29738665 330 - pseudogene predicted gene 9823
Tssr23327 2 29744645 to 29744649 4 - TSS region transcription start site region 23327
Gm13420 2 29744919 to 29751685 6766 - protein coding gene predicted gene 13420
Cpgi11410 2 29747064 to 29747760 696 CpG island CpG island 11410
Cpgi11411 2 29751131 to 29751919 788 CpG island CpG island 11411
Tssr23328 2 29751635 to 29751669 34 - TSS region transcription start site region 23328
Gm13547 2 29759312 to 29764089 4777 + protein coding gene predicted gene 13547
Trub2 2 29761223 to 29787671 26448 - protein coding gene TruB pseudouridine (psi) synthase family member 2
Tssr17015 2 29761555 to 29761567 12 + TSS region transcription start site region 17015
Tssr17016 2 29761606 to 29761611 5 + TSS region transcription start site region 17016
Tssr23329 2 29772163 to 29772172 9 - TSS region transcription start site region 23329
Tssr23330 2 29772191 to 29772196 5 - TSS region transcription start site region 23330
Tssr449 2 29772200 to 29772204 4 - TSS region transcription start site region 449
Tssr23331 2 29772222 to 29772233 11 - TSS region transcription start site region 23331
Tssr23332 2 29772253 to 29772264 11 - TSS region transcription start site region 23332
Tssr450 2 29772549 to 29772556 7 + TSS region transcription start site region 450
Tssr17017 2 29772595 to 29772611 16 + TSS region transcription start site region 17017
Tssr23333 2 29773507 to 29773517 10 - TSS region transcription start site region 23333
Tssr23334 2 29787250 to 29787254 4 - TSS region transcription start site region 23334
Cpgi11412 2 29787377 to 29787673 296 CpG island CpG island 11412
Tssr17018 2 29787482 to 29787511 29 + TSS region transcription start site region 17018
Coq4 2 29787493 to 29797935 10442 + protein coding gene coenzyme Q4
Tssr23335 2 29787628 to 29787680 52 - TSS region transcription start site region 23335
Tssr451 2 29788120 to 29788140 20 - TSS region transcription start site region 451
Cpgi11413 2 29788154 to 29788675 521 CpG island CpG island 11413
Tssr17019 2 29788237 to 29788302 65 + TSS region transcription start site region 17019
Tssr17020 2 29788308 to 29788320 12 + TSS region transcription start site region 17020
Tssr17021 2 29788321 to 29788335 14 + TSS region transcription start site region 17021
Gm52595 2 29798494 to 29798644 150 + pseudogene predicted gene, 52595