Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:28560673-28680676

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cel 2 28555819 to 28563403 7584 - protein coding gene carboxyl ester lipase
Tssr23270 2 28560658 to 28560679 21 - TSS region transcription start site region 23270
Tssr16964 2 28560948 to 28560963 15 + TSS region transcription start site region 16964
Tssr23271 2 28561180 to 28561192 12 - TSS region transcription start site region 23271
Tssr23272 2 28561204 to 28561227 23 - TSS region transcription start site region 23272
Tssr23273 2 28561234 to 28561243 9 - TSS region transcription start site region 23273
Tssr23274 2 28561264 to 28561277 13 - TSS region transcription start site region 23274
Tssr23275 2 28561328 to 28561340 12 - TSS region transcription start site region 23275
Gm13381 2 28562197 to 28576698 14501 + antisense lncRNA gene predicted gene 13381
Tssr23276 2 28562411 to 28562422 11 - TSS region transcription start site region 23276
Tssr23277 2 28562433 to 28562452 19 - TSS region transcription start site region 23277
Tssr16965 2 28562509 to 28562527 18 + TSS region transcription start site region 16965
Tssr23278 2 28563373 to 28563392 19 - TSS region transcription start site region 23278
Gtf3c5 2 28566245 to 28583279 17034 - protein coding gene general transcription factor IIIC, polypeptide 5
Cpgi11389 2 28582563 to 28583377 814 CpG island CpG island 11389
Tssr23279 2 28582716 to 28582724 8 - TSS region transcription start site region 23279
Tssr23280 2 28582977 to 28582996 19 - TSS region transcription start site region 23280
Tssr23281 2 28583011 to 28583020 9 - TSS region transcription start site region 23281
Tssr23282 2 28583147 to 28583174 27 - TSS region transcription start site region 23282
Tssr23283 2 28583195 to 28583230 35 - TSS region transcription start site region 23283
Tssr23284 2 28583239 to 28583274 35 - TSS region transcription start site region 23284
Gm22675 2 28595127 to 28595230 103 + snRNA gene predicted gene, 22675
Gm22824 2 28608195 to 28608286 91 + miRNA gene predicted gene, 22824
Gfi1b 2 28609450 to 28621982 12532 - protein coding gene growth factor independent 1B
Tssr23285 2 28613368 to 28613371 3 - TSS region transcription start site region 23285
Tssr23286 2 28615335 to 28615346 11 - TSS region transcription start site region 23286
Tssr23287 2 28620673 to 28620676 3 - TSS region transcription start site region 23287
Tssr23288 2 28621318 to 28621330 12 - TSS region transcription start site region 23288
Tssr23289 2 28621902 to 28621913 11 - TSS region transcription start site region 23289
Tssr23290 2 28621932 to 28621963 31 - TSS region transcription start site region 23290
Cpgi11390 2 28640808 to 28642083 1275 CpG island CpG island 11390
Tssr16966 2 28641227 to 28641262 35 + TSS region transcription start site region 16966
Tsc1 2 28641228 to 28691167 49939 + protein coding gene tuberous sclerosis 1
Tssr16967 2 28641346 to 28641358 12 + TSS region transcription start site region 16967