Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:28456095-28556475

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700007K13Rik 2 28462001 to 28466324 4323 - protein coding gene RIKEN cDNA 1700007K13 gene
Tssr23236 2 28466266 to 28466359 93 - TSS region transcription start site region 23236
Tssr23237 2 28466397 to 28466421 24 - TSS region transcription start site region 23237
Cpgi11386 2 28467823 to 28468566 743 CpG island CpG island 11386
Tssr16928 2 28468056 to 28468094 38 + TSS region transcription start site region 16928
Mrps2 2 28468066 to 28471178 3112 + protein coding gene mitochondrial ribosomal protein S2
Tssr16929 2 28469607 to 28469620 13 + TSS region transcription start site region 16929
Tssr16930 2 28469780 to 28469791 11 + TSS region transcription start site region 16930
Tssr16931 2 28469835 to 28469853 18 + TSS region transcription start site region 16931
Tssr16932 2 28477083 to 28477093 10 + TSS region transcription start site region 16932
Rpsa-ps9 2 28477166 to 28478050 884 + pseudogene ribosomal protein SA, pseudogene 9
Tssr16933 2 28479372 to 28479397 25 + TSS region transcription start site region 16933
Tssr16934 2 28480174 to 28480185 11 + TSS region transcription start site region 16934
Tssr16935 2 28496883 to 28496893 10 + TSS region transcription start site region 16935
Gbgt1 2 28496891 to 28505415 8524 + protein coding gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Tssr16936 2 28496915 to 28496963 48 + TSS region transcription start site region 16936
Gm10134 2 28506095 to 28506475 380 + protein coding gene predicted gene 10134
Tssr16937 2 28506945 to 28506977 32 + TSS region transcription start site region 16937
Cpgi11387 2 28512512 to 28514113 1601 CpG island CpG island 11387
Tssr16938 2 28513078 to 28513104 26 + TSS region transcription start site region 16938
Tssr16939 2 28513105 to 28513126 21 + TSS region transcription start site region 16939
Ralgds 2 28513125 to 28553081 39956 + protein coding gene ral guanine nucleotide dissociation stimulator
Tssr16940 2 28513128 to 28513149 21 + TSS region transcription start site region 16940
Tssr16941 2 28513243 to 28513323 80 + TSS region transcription start site region 16941
Tssr16942 2 28513360 to 28513366 6 + TSS region transcription start site region 16942
Tssr16943 2 28517482 to 28517484 2 + TSS region transcription start site region 16943
Tssr16944 2 28523985 to 28523995 10 + TSS region transcription start site region 16944
Tssr23238 2 28524511 to 28524526 15 - TSS region transcription start site region 23238
Tssr16945 2 28527788 to 28527804 16 + TSS region transcription start site region 16945
Cpgi11388 2 28533045 to 28533994 949 CpG island CpG island 11388
Tssr23239 2 28533108 to 28533119 11 - TSS region transcription start site region 23239
Tssr16946 2 28533423 to 28533482 59 + TSS region transcription start site region 16946
Tssr16947 2 28534343 to 28534354 11 + TSS region transcription start site region 16947
Tssr23240 2 28537522 to 28537528 6 - TSS region transcription start site region 23240
Tssr23241 2 28539702 to 28539720 18 - TSS region transcription start site region 23241
Tssr23242 2 28539759 to 28539771 12 - TSS region transcription start site region 23242
Tssr16948 2 28540227 to 28540238 11 + TSS region transcription start site region 16948
Tssr16949 2 28540255 to 28540298 43 + TSS region transcription start site region 16949
Tssr16950 2 28542436 to 28542447 11 + TSS region transcription start site region 16950
Tssr16951 2 28545066 to 28545104 38 + TSS region transcription start site region 16951
Tssr16952 2 28549463 to 28549476 13 + TSS region transcription start site region 16952
Tssr16953 2 28552181 to 28552193 12 + TSS region transcription start site region 16953
Cel 2 28555819 to 28563403 7584 - protein coding gene carboxyl ester lipase
Tssr16954 2 28555856 to 28555863 7 + TSS region transcription start site region 16954
Tssr16955 2 28555878 to 28555909 31 + TSS region transcription start site region 16955
Tssr23243 2 28555882 to 28555885 3 - TSS region transcription start site region 23243
Tssr23244 2 28555890 to 28555895 5 - TSS region transcription start site region 23244
Tssr23245 2 28555923 to 28555940 17 - TSS region transcription start site region 23245
Tssr23246 2 28556078 to 28556086 8 - TSS region transcription start site region 23246
Tssr23247 2 28556112 to 28556121 9 - TSS region transcription start site region 23247
Tssr23248 2 28556174 to 28556195 21 - TSS region transcription start site region 23248
Tssr23249 2 28556287 to 28556298 11 - TSS region transcription start site region 23249
Tssr23250 2 28556320 to 28556370 50 - TSS region transcription start site region 23250