Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:28212324-28552330

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61 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfm1 2 28193093 to 28230736 37643 + protein coding gene olfactomedin 1
Tssr16915 2 28214139 to 28214155 16 + TSS region transcription start site region 16915
Tssr16916 2 28222427 to 28222461 34 + TSS region transcription start site region 16916
Tssr16917 2 28229124 to 28229136 12 + TSS region transcription start site region 16917
Tssr16918 2 28229344 to 28229380 36 + TSS region transcription start site region 16918
Tssr16919 2 28229473 to 28229490 17 + TSS region transcription start site region 16919
Tssr16920 2 28229750 to 28229761 11 + TSS region transcription start site region 16920
Tssr16921 2 28229950 to 28229970 20 + TSS region transcription start site region 16921
Tssr16922 2 28230025 to 28230032 7 + TSS region transcription start site region 16922
Tssr16923 2 28230102 to 28230114 12 + TSS region transcription start site region 16923
Tssr16924 2 28230346 to 28230358 12 + TSS region transcription start site region 16924
Carcdq3 2 28289138 to 3233903 -25055235 QTL cardiac collagen deposition QTL 3
Gm13373 2 28315016 to 28324050 9034 - lincRNA gene predicted gene 13373
Tssr23235 2 28325473 to 28325481 8 - TSS region transcription start site region 23235
Tssr16925 2 28382324 to 28382330 6 + TSS region transcription start site region 16925
Cpgi11385 2 28446167 to 28447590 1423 CpG island CpG island 11385
Ppp1r26 2 28446800 to 28455508 8708 + protein coding gene protein phosphatase 1, regulatory subunit 26
Tssr16926 2 28446831 to 28446878 47 + TSS region transcription start site region 16926
Tssr16927 2 28446959 to 28446992 33 + TSS region transcription start site region 16927
1700007K13Rik 2 28462001 to 28466324 4323 - protein coding gene RIKEN cDNA 1700007K13 gene
Tssr23236 2 28466266 to 28466359 93 - TSS region transcription start site region 23236
Tssr23237 2 28466397 to 28466421 24 - TSS region transcription start site region 23237
Cpgi11386 2 28467823 to 28468566 743 CpG island CpG island 11386
Tssr16928 2 28468056 to 28468094 38 + TSS region transcription start site region 16928
Mrps2 2 28468066 to 28471178 3112 + protein coding gene mitochondrial ribosomal protein S2
Tssr16929 2 28469607 to 28469620 13 + TSS region transcription start site region 16929
Tssr16930 2 28469780 to 28469791 11 + TSS region transcription start site region 16930
Tssr16931 2 28469835 to 28469853 18 + TSS region transcription start site region 16931
Tssr16932 2 28477083 to 28477093 10 + TSS region transcription start site region 16932
Rpsa-ps9 2 28477166 to 28478050 884 + pseudogene ribosomal protein SA, pseudogene 9
Tssr16933 2 28479372 to 28479397 25 + TSS region transcription start site region 16933
Tssr16934 2 28480174 to 28480185 11 + TSS region transcription start site region 16934
Tssr16935 2 28496883 to 28496893 10 + TSS region transcription start site region 16935
Gbgt1 2 28496891 to 28505415 8524 + protein coding gene globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Tssr16936 2 28496915 to 28496963 48 + TSS region transcription start site region 16936
Gm10134 2 28506095 to 28506475 380 + protein coding gene predicted gene 10134
Tssr16937 2 28506945 to 28506977 32 + TSS region transcription start site region 16937
Cpgi11387 2 28512512 to 28514113 1601 CpG island CpG island 11387
Tssr16938 2 28513078 to 28513104 26 + TSS region transcription start site region 16938
Tssr16939 2 28513105 to 28513126 21 + TSS region transcription start site region 16939
Ralgds 2 28513125 to 28553081 39956 + protein coding gene ral guanine nucleotide dissociation stimulator
Tssr16940 2 28513128 to 28513149 21 + TSS region transcription start site region 16940
Tssr16941 2 28513243 to 28513323 80 + TSS region transcription start site region 16941
Tssr16942 2 28513360 to 28513366 6 + TSS region transcription start site region 16942
Tssr16943 2 28517482 to 28517484 2 + TSS region transcription start site region 16943
Tssr16944 2 28523985 to 28523995 10 + TSS region transcription start site region 16944
Tssr23238 2 28524511 to 28524526 15 - TSS region transcription start site region 23238
Tssr16945 2 28527788 to 28527804 16 + TSS region transcription start site region 16945
Cpgi11388 2 28533045 to 28533994 949 CpG island CpG island 11388
Tssr23239 2 28533108 to 28533119 11 - TSS region transcription start site region 23239
Tssr16946 2 28533423 to 28533482 59 + TSS region transcription start site region 16946
Tssr16947 2 28534343 to 28534354 11 + TSS region transcription start site region 16947
Tssr23240 2 28537522 to 28537528 6 - TSS region transcription start site region 23240
Tssr23241 2 28539702 to 28539720 18 - TSS region transcription start site region 23241
Tssr23242 2 28539759 to 28539771 12 - TSS region transcription start site region 23242
Tssr16948 2 28540227 to 28540238 11 + TSS region transcription start site region 16948
Tssr16949 2 28540255 to 28540298 43 + TSS region transcription start site region 16949
Tssr16950 2 28542436 to 28542447 11 + TSS region transcription start site region 16950
Tssr16951 2 28545066 to 28545104 38 + TSS region transcription start site region 16951
Tssr16952 2 28549463 to 28549476 13 + TSS region transcription start site region 16952
Tssr16953 2 28552181 to 28552193 12 + TSS region transcription start site region 16953