Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:27995439-28195444

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Col5a1	2	27886425 to 28039514	153089	+	protein coding gene	collagen, type V, alpha 1
Tssr16890	2	28001955 to 28001989	34	+	TSS region	transcription start site region 16890
Gm13372	2	28025417 to 28030437	5020	-	unclassified non-coding RNA gene	predicted gene 13372
Tssr16891	2	28032055 to 28032073	18	+	TSS region	transcription start site region 16891
Tssr16892	2	28032087 to 28032098	11	+	TSS region	transcription start site region 16892
Tssr16893	2	28032770 to 28032793	23	+	TSS region	transcription start site region 16893
Fcnb	2	28076479 to 28084903	8424	-	protein coding gene	ficolin B
Tssr16894	2	28076509 to 28076510	1	+	TSS region	transcription start site region 16894
Tssr23234	2	28084877 to 28084891	14	-	TSS region	transcription start site region 23234
Gm13371	2	28092032 to 28093514	1482	-	lincRNA gene	predicted gene 13371
Tssr16895	2	28095439 to 28095444	5	+	TSS region	transcription start site region 16895
Tssr16896	2	28095448 to 28095486	38	+	TSS region	transcription start site region 16896
F730016J06Rik	2	28095477 to 28127731	32254	+	lincRNA gene	RIKEN cDNA F730016J06 gene
Cpgi11382	2	28133734 to 28134004	270		CpG island	CpG island 11382
Cpgi11383	2	28192650 to 28193937	1287		CpG island	CpG island 11383
Tssr16897	2	28192910 to 28192921	11	+	TSS region	transcription start site region 16897
Tssr16898	2	28192932 to 28192937	5	+	TSS region	transcription start site region 16898
Tssr16899	2	28192938 to 28192970	32	+	TSS region	transcription start site region 16899
Tssr16900	2	28192971 to 28192985	14	+	TSS region	transcription start site region 16900
Tssr16901	2	28193007 to 28193028	21	+	TSS region	transcription start site region 16901
Tssr16902	2	28193043 to 28193050	7	+	TSS region	transcription start site region 16902
Tssr16903	2	28193069 to 28193076	7	+	TSS region	transcription start site region 16903
Olfm1	2	28193093 to 28230736	37643	+	protein coding gene	olfactomedin 1
Tssr16904	2	28193107 to 28193114	7	+	TSS region	transcription start site region 16904
Tssr16905	2	28193128 to 28193183	55	+	TSS region	transcription start site region 16905
Tssr16906	2	28193192 to 28193214	22	+	TSS region	transcription start site region 16906
Tssr16907	2	28193219 to 28193236	17	+	TSS region	transcription start site region 16907
Tssr16908	2	28193249 to 28193278	29	+	TSS region	transcription start site region 16908
Tssr16909	2	28193295 to 28193304	9	+	TSS region	transcription start site region 16909
Tssr16910	2	28193323 to 28193338	15	+	TSS region	transcription start site region 16910