Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:27900417-28155437

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Col5a1 2 27886425 to 28039514 153089 + protein coding gene collagen, type V, alpha 1
Tssr16887 2 27911889 to 27911892 3 + TSS region transcription start site region 16887
Tssr446 2 27950634 to 27950651 17 + TSS region transcription start site region 446
Tssr16888 2 27951283 to 27951311 28 + TSS region transcription start site region 16888
Tssr16889 2 27951365 to 27951379 14 + TSS region transcription start site region 16889
Tssr16890 2 28001955 to 28001989 34 + TSS region transcription start site region 16890
Gm13372 2 28025417 to 28030437 5020 - unclassified non-coding RNA gene predicted gene 13372
Tssr16891 2 28032055 to 28032073 18 + TSS region transcription start site region 16891
Tssr16892 2 28032087 to 28032098 11 + TSS region transcription start site region 16892
Tssr16893 2 28032770 to 28032793 23 + TSS region transcription start site region 16893
Fcnb 2 28076479 to 28084903 8424 - protein coding gene ficolin B
Tssr16894 2 28076509 to 28076510 1 + TSS region transcription start site region 16894
Tssr23234 2 28084877 to 28084891 14 - TSS region transcription start site region 23234
Gm13371 2 28092032 to 28093514 1482 - lincRNA gene predicted gene 13371
Tssr16895 2 28095439 to 28095444 5 + TSS region transcription start site region 16895
Tssr16896 2 28095448 to 28095486 38 + TSS region transcription start site region 16896
F730016J06Rik 2 28095477 to 28127731 32254 + lincRNA gene RIKEN cDNA F730016J06 gene
Cpgi11382 2 28133734 to 28134004 270 CpG island CpG island 11382