MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:27507654-27648897

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Brd3	2	27445576 to 27507657	62081	-	protein coding gene	bromodomain containing 3
Tssr23227	2	27507656 to 27507662	6	-	TSS region	transcription start site region 23227
Cpgi11378	2	27514619 to 27516023	1404		CpG island	CpG island 11378
Tssr23228	2	27515051 to 27515089	38	-	TSS region	transcription start site region 23228
Wdr5	2	27515157 to 27536535	21378	+	protein coding gene	WD repeat domain 5
Tssr16855	2	27515162 to 27515217	55	+	TSS region	transcription start site region 16855
Tssr16856	2	27515218 to 27515229	11	+	TSS region	transcription start site region 16856
Tssr444	2	27535374 to 27535378	4	+	TSS region	transcription start site region 444
Gm25541	2	27539805 to 27539930	125	-	snRNA gene	predicted gene, 25541
Cpgi11379	2	27540111 to 27540625	514		CpG island	CpG island 11379
Tssr16857	2	27540419 to 27540463	44	+	TSS region	transcription start site region 16857
Gm13421	2	27540426 to 27543362	2936	+	lncRNA gene	predicted gene 13421
Tssr16858	2	27544848 to 27544875	27	+	TSS region	transcription start site region 16858
Tssr23229	2	27548088 to 27548114	26	-	TSS region	transcription start site region 23229
Tssr23230	2	27570947 to 27570958	11	-	TSS region	transcription start site region 23230
Gm39776	2	27577654 to 27578897	1243	+	lncRNA gene	predicted gene, 39776
Tssr23231	2	27578664 to 27578670	6	-	TSS region	transcription start site region 23231
Tssr23232	2	27596359 to 27596381	22	-	TSS region	transcription start site region 23232
Tssr16859	2	27625195 to 27625200	5	+	TSS region	transcription start site region 16859