Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:27505157-27546535

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Brd3 2 27445576 to 27507657 62081 - protein coding gene bromodomain containing 3
Tssr16853 2 27505846 to 27505858 12 + TSS region transcription start site region 16853
Tssr16854 2 27506855 to 27506858 3 + TSS region transcription start site region 16854
Tssr23224 2 27507567 to 27507591 24 - TSS region transcription start site region 23224
Tssr23225 2 27507604 to 27507620 16 - TSS region transcription start site region 23225
Tssr23226 2 27507636 to 27507647 11 - TSS region transcription start site region 23226
Tssr23227 2 27507656 to 27507662 6 - TSS region transcription start site region 23227
Cpgi11378 2 27514619 to 27516023 1404 CpG island CpG island 11378
Tssr23228 2 27515051 to 27515089 38 - TSS region transcription start site region 23228
Wdr5 2 27515157 to 27536535 21378 + protein coding gene WD repeat domain 5
Tssr16855 2 27515162 to 27515217 55 + TSS region transcription start site region 16855
Tssr16856 2 27515218 to 27515229 11 + TSS region transcription start site region 16856
Tssr444 2 27535374 to 27535378 4 + TSS region transcription start site region 444
Gm25541 2 27539805 to 27539930 125 - snRNA gene predicted gene, 25541
Cpgi11379 2 27540111 to 27540625 514 CpG island CpG island 11379
Tssr16857 2 27540419 to 27540463 44 + TSS region transcription start site region 16857
Gm13421 2 27540426 to 27543362 2936 + lncRNA gene predicted gene 13421
Tssr16858 2 27544848 to 27544875 27 + TSS region transcription start site region 16858