Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:27211704-27446297

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sardh 2 27188393 to 27248332 59939 - protein coding gene sarcosine dehydrogenase
Sardhos 2 27189382 to 27234710 45328 + antisense lncRNA gene sarcosine dehydrogenase, opposite strand
Tssr23196 2 27215182 to 27215184 2 - TSS region transcription start site region 23196
Tssr23197 2 27225193 to 27225209 16 - TSS region transcription start site region 23197
Tssr16848 2 27229541 to 27229542 1 + TSS region transcription start site region 16848
D2Mit294 2 27236538 to 27236662 124 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 294
Tssr23198 2 27246722 to 27246733 11 - TSS region transcription start site region 23198
Tssr23199 2 27246741 to 27246750 9 - TSS region transcription start site region 23199
Tssr23200 2 27246755 to 27246777 22 - TSS region transcription start site region 23200
Tssr23201 2 27246779 to 27246784 5 - TSS region transcription start site region 23201
Tssr23202 2 27246785 to 27246803 18 - TSS region transcription start site region 23202
Tssr23203 2 27246814 to 27246875 61 - TSS region transcription start site region 23203
Tssr23204 2 27246886 to 27246904 18 - TSS region transcription start site region 23204
Tssr23205 2 27247184 to 27247193 9 - TSS region transcription start site region 23205
Tssr23206 2 27247195 to 27247207 12 - TSS region transcription start site region 23206
Tssr23207 2 27247210 to 27247254 44 - TSS region transcription start site region 23207
Tssr23208 2 27247260 to 27247303 43 - TSS region transcription start site region 23208
Tssr23209 2 27248304 to 27248320 16 - TSS region transcription start site region 23209
Tssr23210 2 27248335 to 27248346 11 - TSS region transcription start site region 23210
Vav2 2 27262104 to 27427033 164929 - protein coding gene vav 2 oncogene
AA645442 2 27326704 to 27331297 4593 + antisense lncRNA gene expressed sequence AA645442
Tssr23211 2 27392195 to 27392236 41 - TSS region transcription start site region 23211
Gm24049 2 27401852 to 27401951 99 + miRNA gene predicted gene, 24049
Tssr23212 2 27404725 to 27404727 2 - TSS region transcription start site region 23212
D2Mit431.1 2 27422136 to 27422266 130 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 431.1
D2Mit431 2 27422294 to 27422391 97 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 431
Cpgi11368 2 27425288 to 27427541 2253 CpG island CpG island 11368
Tssr23213 2 27426489 to 27426535 46 - TSS region transcription start site region 23213
Tssr23214 2 27426536 to 27426563 27 - TSS region transcription start site region 23214
Tssr23215 2 27426599 to 27426613 14 - TSS region transcription start site region 23215
Tssr23216 2 27426992 to 27427061 69 - TSS region transcription start site region 23216
D2Mit180 2 27434096 to 27434243 147 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 180
Brd3os 2 27442324 to 27444221 1897 + protein coding gene bromodomain containing 3, opposite strand
Cpgi11369 2 27442331 to 27442907 576 CpG island CpG island 11369
Tssr16849 2 27442457 to 27442570 113 + TSS region transcription start site region 16849
Brd3 2 27445576 to 27507657 62081 - protein coding gene bromodomain containing 3