Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:26913987-27014775

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Surf1 2 26913381 to 26916530 3149 - protein coding gene surfeit gene 1
Tssr23164 2 26915690 to 26915698 8 - TSS region transcription start site region 23164
Cpgi11362 2 26916056 to 26916979 923 CpG island CpG island 11362
Tssr439 2 26916305 to 26916308 3 - TSS region transcription start site region 439
Tssr23165 2 26916323 to 26916365 42 - TSS region transcription start site region 23165
Tssr16826 2 26916360 to 26916396 36 + TSS region transcription start site region 16826
Surf2 2 26916365 to 26920172 3807 + protein coding gene surfeit gene 2
Tssr16827 2 26916400 to 26916421 21 + TSS region transcription start site region 16827
Tssr23166 2 26916505 to 26916551 46 - TSS region transcription start site region 23166
Tssr16828 2 26916787 to 26916835 48 + TSS region transcription start site region 16828
Surf4 2 26920041 to 26933776 13735 - protein coding gene surfeit gene 4
Gm36591 2 26928248 to 26933268 5020 - lncRNA gene predicted gene, 36591
Cpgi11363 2 26932609 to 26934247 1638 CpG island CpG island 11363
Tssr23167 2 26933332 to 26933349 17 - TSS region transcription start site region 23167
Tssr23168 2 26933355 to 26933396 41 - TSS region transcription start site region 23168
Tssr23169 2 26933403 to 26933467 64 - TSS region transcription start site region 23169
Tssr440 2 26933628 to 26933637 9 + TSS region transcription start site region 440
Tssr16829 2 26934028 to 26934084 56 + TSS region transcription start site region 16829
Stkld1 2 26934047 to 26953496 19449 + protein coding gene serine/threonine kinase-like domain containing 1
Gm39775 2 26949199 to 26952664 3465 - lncRNA gene predicted gene, 39775
Rexo4 2 26953563 to 26964386 10823 - protein coding gene REX4, 3'-5' exonuclease
Cpgi11364 2 26963987 to 26964775 788 CpG island CpG island 11364
Tssr23170 2 26964277 to 26964363 86 - TSS region transcription start site region 23170
Gm36649 2 26970009 to 26975684 5675 - lncRNA gene predicted gene, 36649
Adamts13 2 26973416 to 27009628 36212 + protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 13
Tssr16830 2 26973468 to 26973479 11 + TSS region transcription start site region 16830
Tssr16831 2 26973482 to 26973505 23 + TSS region transcription start site region 16831
Tssr441 2 26974007 to 26974024 17 - TSS region transcription start site region 441
Tssr16832 2 27006592 to 27006604 12 + TSS region transcription start site region 16832
Cpgi11365 2 27009771 to 27010565 794 CpG island CpG island 11365
Cacfd1 2 27009926 to 27021089 11163 + protein coding gene calcium channel flower domain containing 1
Tssr16833 2 27009932 to 27009935 3 + TSS region transcription start site region 16833
Tssr16834 2 27009936 to 27009993 57 + TSS region transcription start site region 16834