Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:25819215-25959218

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr23049 2 25822112 to 25822116 4 - TSS region transcription start site region 23049
Tssr16772 2 25823144 to 25823160 16 + TSS region transcription start site region 16772
Lcn9 2 25823153 to 25825537 2384 + protein coding gene lipocalin 9
Tssr16773 2 25823465 to 25823513 48 + TSS region transcription start site region 16773
Tssr16774 2 25823685 to 25823703 18 + TSS region transcription start site region 16774
Sohlh1 2 25842995 to 25847248 4253 - protein coding gene spermatogenesis and oogenesis specific basic helix-loop-helix 1
Tssr23050 2 25847296 to 25847307 11 - TSS region transcription start site region 23050
Tssr23051 2 25847324 to 25847339 15 - TSS region transcription start site region 23051
Cpgi11332 2 25863536 to 25864559 1023 CpG island CpG island 11332
Kcnt1 2 25863791 to 25918273 54482 + protein coding gene potassium channel, subfamily T, member 1
Cpgi11333 2 25877283 to 25878542 1259 CpG island CpG island 11333
Tssr16775 2 25877847 to 25877883 36 + TSS region transcription start site region 16775
Tssr16776 2 25877887 to 25877898 11 + TSS region transcription start site region 16776
Tssr16777 2 25889215 to 25889218 3 + TSS region transcription start site region 16777
6230426I18Rik 2 25923343 to 25924808 1465 unclassified gene RIKEN cDNA 6230426I18 gene
Camsap1 2 25926838 to 25983282 56444 - protein coding gene calmodulin regulated spectrin-associated protein 1
Tssr23052 2 25945826 to 25945832 6 - TSS region transcription start site region 23052
Tssr23053 2 25946080 to 25946091 11 - TSS region transcription start site region 23053
D2Mit318 2 25950374 to 25950574 200 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 318