MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:25778153-25870537

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lcn11	2	25777017 to 25780279	3262	+	protein coding gene	lipocalin 11
Gm13538	2	25783940 to 25794650	10710	-	unclassified non-coding RNA gene	predicted gene 13538
Gm13539	2	25784617 to 25787022	2405	+	lncRNA gene	predicted gene 13539
Tssr23046	2	25785674 to 25785693	19	-	TSS region	transcription start site region 23046
Glt6d1	2	25793859 to 25815848	21989	-	protein coding gene	glycosyltransferase 6 domain containing 1
Gm35689	2	25814503 to 25815771	1268	+	lncRNA gene	predicted gene, 35689
Tssr23047	2	25815839 to 25815858	19	-	TSS region	transcription start site region 23047
Tssr23048	2	25815862 to 25815871	9	-	TSS region	transcription start site region 23048
Tssr23049	2	25822112 to 25822116	4	-	TSS region	transcription start site region 23049
Tssr16772	2	25823144 to 25823160	16	+	TSS region	transcription start site region 16772
Lcn9	2	25823153 to 25825537	2384	+	protein coding gene	lipocalin 9
Tssr16773	2	25823465 to 25823513	48	+	TSS region	transcription start site region 16773
Tssr16774	2	25823685 to 25823703	18	+	TSS region	transcription start site region 16774
Sohlh1	2	25842995 to 25847248	4253	-	protein coding gene	spermatogenesis and oogenesis specific basic helix-loop-helix 1
Tssr23050	2	25847296 to 25847307	11	-	TSS region	transcription start site region 23050
Tssr23051	2	25847324 to 25847339	15	-	TSS region	transcription start site region 23051
Cpgi11332	2	25863536 to 25864559	1023		CpG island	CpG island 11332
Kcnt1	2	25863791 to 25918273	54482	+	protein coding gene	potassium channel, subfamily T, member 1