Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:25468434-25518439

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptgds 2 25466709 to 25470046 3337 - protein coding gene prostaglandin D2 synthase (brain)
Tssr16730 2 25468830 to 25468878 48 + TSS region transcription start site region 16730
Tssr22992 2 25468856 to 25468868 12 - TSS region transcription start site region 22992
Tssr22993 2 25468881 to 25468896 15 - TSS region transcription start site region 22993
Tssr16731 2 25468985 to 25468993 8 + TSS region transcription start site region 16731
Tssr16732 2 25469004 to 25469014 10 + TSS region transcription start site region 16732
Tssr22994 2 25469025 to 25469044 19 - TSS region transcription start site region 22994
Tssr22995 2 25469093 to 25469106 13 - TSS region transcription start site region 22995
Tssr22996 2 25469111 to 25469122 11 - TSS region transcription start site region 22996
Tssr22997 2 25469123 to 25469193 70 - TSS region transcription start site region 22997
Tssr22998 2 25469742 to 25469758 16 - TSS region transcription start site region 22998
Tssr432 2 25470014 to 25470019 5 - TSS region transcription start site region 432
Tssr22999 2 25470031 to 25470094 63 - TSS region transcription start site region 22999
Tssr23000 2 25470096 to 25470110 14 - TSS region transcription start site region 23000
Tssr23001 2 25470111 to 25470112 1 - TSS region transcription start site region 23001
Tssr23002 2 25470417 to 25470456 39 - TSS region transcription start site region 23002
Gm35287 2 25475304 to 25478556 3252 - lncRNA gene predicted gene, 35287
Tssr23003 2 25478060 to 25478072 12 - TSS region transcription start site region 23003
Tssr23004 2 25478075 to 25478094 19 - TSS region transcription start site region 23004
Tssr23005 2 25478095 to 25478115 20 - TSS region transcription start site region 23005
Tssr23006 2 25478350 to 25478356 6 - TSS region transcription start site region 23006
Lcn12 2 25490845 to 25493911 3066 - protein coding gene lipocalin 12
Tssr23007 2 25493434 to 25493439 5 - TSS region transcription start site region 23007
Tssr23008 2 25493443 to 25493464 21 - TSS region transcription start site region 23008
Tssr23009 2 25493466 to 25493479 13 - TSS region transcription start site region 23009
Tssr23010 2 25493882 to 25493889 7 - TSS region transcription start site region 23010
Tssr23011 2 25493894 to 25493904 10 - TSS region transcription start site region 23011
Tssr23012 2 25493905 to 25493960 55 - TSS region transcription start site region 23012
Tssr23013 2 25493968 to 25493972 4 - TSS region transcription start site region 23013
C8g 2 25498651 to 25501719 3068 - protein coding gene complement component 8, gamma polypeptide
Tssr433 2 25500141 to 25500147 6 - TSS region transcription start site region 433
Tssr23014 2 25500237 to 25500277 40 - TSS region transcription start site region 23014
Tssr23015 2 25500279 to 25500290 11 - TSS region transcription start site region 23015
Cpgi11322 2 25500649 to 25501197 548 CpG island CpG island 11322
Tssr23016 2 25500664 to 25500692 28 - TSS region transcription start site region 23016
Tssr16733 2 25500764 to 25500769 5 + TSS region transcription start site region 16733
Fbxw5 2 25500767 to 25505471 4704 + protein coding gene F-box and WD-40 domain protein 5
Tssr16734 2 25500772 to 25500783 11 + TSS region transcription start site region 16734
Tssr16735 2 25500789 to 25500864 75 + TSS region transcription start site region 16735
Tssr23017 2 25501717 to 25501724 7 - TSS region transcription start site region 23017
Tssr23018 2 25501743 to 25501759 16 - TSS region transcription start site region 23018
Tssr16736 2 25501819 to 25501841 22 + TSS region transcription start site region 16736
Tssr16737 2 25501843 to 25501850 7 + TSS region transcription start site region 16737
Tssr16738 2 25501860 to 25501874 14 + TSS region transcription start site region 16738
Traf2 2 25517982 to 25546940 28958 - protein coding gene TNF receptor-associated factor 2