Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:25125758-25238339

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm13387 2 25122603 to 25145396 22793 - lincRNA gene predicted gene 13387
Cpgi11294 2 25167922 to 25168445 523 CpG island CpG island 11294
Cpgi11295 2 25180372 to 25182057 1685 CpG island CpG island 11295
Tssr16660 2 25180737 to 25180764 27 + TSS region transcription start site region 16660
Nrarp 2 25180758 to 25183339 2581 + protein coding gene Notch-regulated ankyrin repeat protein
Gm38287 2 25180781 to 25183339 2558 - antisense lncRNA gene predicted gene, 38287
Cpgi11296 2 25185577 to 25186517 940 CpG island CpG island 11296
Tor4a 2 25192966 to 25196886 3920 - protein coding gene torsin family 4, member A
Tssr16661 2 25194806 to 25194820 14 + TSS region transcription start site region 16661
Cpgi11297 2 25194849 to 25195980 1131 CpG island CpG island 11297
Tssr22938 2 25196579 to 25196604 25 - TSS region transcription start site region 22938
Tssr22939 2 25196607 to 25196640 33 - TSS region transcription start site region 22939
Tssr22940 2 25196708 to 25196715 7 - TSS region transcription start site region 22940
Tssr22941 2 25196742 to 25196755 13 - TSS region transcription start site region 22941
Tssr22942 2 25196759 to 25196823 64 - TSS region transcription start site region 22942
Nelfb 2 25199712 to 25211489 11777 - protein coding gene negative elongation factor complex member B
Gm22572 2 25208623 to 25208727 104 + snRNA gene predicted gene, 22572
Cpgi11298 2 25210708 to 25211653 945 CpG island CpG island 11298
Tssr22943 2 25211344 to 25211357 13 - TSS region transcription start site region 22943
Tssr22944 2 25211367 to 25211436 69 - TSS region transcription start site region 22944
Stpg3 2 25212207 to 25214637 2430 - protein coding gene sperm tail PG rich repeat containing 3
Cpgi11299 2 25213308 to 25213697 389 CpG island CpG island 11299
Tssr22945 2 25214581 to 25214608 27 - TSS region transcription start site region 22945
Tssr22946 2 25214616 to 25214623 7 - TSS region transcription start site region 22946
Tssr22947 2 25214628 to 25214633 5 - TSS region transcription start site region 22947
Tssr16662 2 25214691 to 25214700 9 + TSS region transcription start site region 16662
Tssr16663 2 25214706 to 25214755 49 + TSS region transcription start site region 16663
Tssr22948 2 25218647 to 25218674 27 - TSS region transcription start site region 22948
Tssr16664 2 25218741 to 25218750 9 + TSS region transcription start site region 16664
Fam166a 2 25218745 to 25222280 3535 + protein coding gene family with sequence similarity 166, member A
Tssr16665 2 25218752 to 25218799 47 + TSS region transcription start site region 16665
Tubb4b 2 25222160 to 25224702 2542 - protein coding gene tubulin, beta 4B class IVB
Cpgi11300 2 25223768 to 25225274 1506 CpG island CpG island 11300
Tssr22949 2 25224230 to 25224268 38 - TSS region transcription start site region 22949
Tssr22950 2 25224653 to 25224659 6 - TSS region transcription start site region 22950
Tssr16666 2 25225043 to 25225071 28 + TSS region transcription start site region 16666
Tssr16667 2 25225363 to 25225375 12 + TSS region transcription start site region 16667
Tssr16668 2 25225416 to 25225431 15 + TSS region transcription start site region 16668
Tssr22951 2 25228420 to 25228459 39 - TSS region transcription start site region 22951
Slc34a3 2 25228897 to 25234271 5374 - protein coding gene solute carrier family 34 (sodium phosphate), member 3
Tssr22952 2 25234177 to 25234192 15 - TSS region transcription start site region 22952
Tssr22953 2 25234203 to 25234223 20 - TSS region transcription start site region 22953
Tssr22954 2 25234227 to 25234251 24 - TSS region transcription start site region 22954
Rnf224 2 25234476 to 25236787 2311 - protein coding gene ring finger protein 224