Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:24989370-25127881

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pnpla7 2 24976033 to 25054057 78024 + protein coding gene patatin-like phospholipase domain containing 7
Tssr16645 2 24992632 to 24992651 19 + TSS region transcription start site region 16645
Gm13369 2 24993357 to 24994343 986 - pseudogene predicted gene 13369
Tssr16646 2 24994385 to 24994394 9 + TSS region transcription start site region 16646
Gm25518 2 25006152 to 25006258 106 - snRNA gene predicted gene, 25518
Tssr16647 2 25025610 to 25025615 5 + TSS region transcription start site region 16647
Gm24875 2 25031350 to 25031453 103 - snRNA gene predicted gene, 24875
Tssr428 2 25047971 to 25047982 11 + TSS region transcription start site region 428
Tssr16648 2 25051642 to 25051684 42 + TSS region transcription start site region 16648
Cpgi11292 2 25054194 to 25055023 829 CpG island CpG island 11292
Nsmf 2 25054370 to 25062881 8511 + protein coding gene NMDA receptor synaptonuclear signaling and neuronal migration factor
Tssr16649 2 25054374 to 25054391 17 + TSS region transcription start site region 16649
Tssr16650 2 25054396 to 25054440 44 + TSS region transcription start site region 16650
Tssr16651 2 25054445 to 25054456 11 + TSS region transcription start site region 16651
Tssr16652 2 25054472 to 25054483 11 + TSS region transcription start site region 16652
Tssr16653 2 25054497 to 25054529 32 + TSS region transcription start site region 16653
Gm24328 2 25055109 to 25055175 66 - miRNA gene predicted gene, 24328
Mir7664 2 25059811 to 25059873 62 + miRNA gene microRNA 7664
Tssr16654 2 25062719 to 25062728 9 + TSS region transcription start site region 16654
Tssr16655 2 25062811 to 25062825 14 + TSS region transcription start site region 16655
Gm39770 2 25070376 to 25072673 2297 - lncRNA gene predicted gene, 39770
Tssr429 2 25079177 to 25079198 21 + TSS region transcription start site region 429
Tssr22933 2 25080208 to 25080239 31 - TSS region transcription start site region 22933
Tssr16656 2 25080296 to 25080310 14 + TSS region transcription start site region 16656
Entpd8 2 25080304 to 25085716 5412 + protein coding gene ectonucleoside triphosphate diphosphohydrolase 8
Tssr16657 2 25080316 to 25080343 27 + TSS region transcription start site region 16657
Tssr16658 2 25080481 to 25080492 11 + TSS region transcription start site region 16658
Tssr16659 2 25080497 to 25080530 33 + TSS region transcription start site region 16659
Noxa1 2 25085667 to 25095149 9482 - protein coding gene NADPH oxidase activator 1
Cpgi11293 2 25094736 to 25094982 246 CpG island CpG island 11293
Tssr22934 2 25095080 to 25095092 12 - TSS region transcription start site region 22934
Tssr22935 2 25095095 to 25095110 15 - TSS region transcription start site region 22935
Tssr22936 2 25095125 to 25095138 13 - TSS region transcription start site region 22936
Tssr22937 2 25095152 to 25095169 17 - TSS region transcription start site region 22937
Gm13387 2 25122603 to 25145396 22793 - lincRNA gene predicted gene 13387