Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:23088860-23929307

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acbd5 2 23067689 to 23114513 46824 + protein coding gene acyl-Coenzyme A binding domain containing 5
Tssr16538 2 23098089 to 23098093 4 + TSS region transcription start site region 16538
D2Mit465 2 23109782 to 23109908 126 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 465
Mastl 2 23116539 to 23156024 39485 - protein coding gene microtubule associated serine/threonine kinase-like
Tssr425 2 23138478 to 23138481 3 + TSS region transcription start site region 425
Tssr16539 2 23155509 to 23155530 21 + TSS region transcription start site region 16539
Cpgi11275 2 23155539 to 23156865 1326 CpG island CpG island 11275
Tssr22892 2 23155864 to 23155925 61 - TSS region transcription start site region 22892
Tssr16540 2 23155954 to 23155980 26 + TSS region transcription start site region 16540
Tssr16541 2 23156013 to 23156023 10 + TSS region transcription start site region 16541
Tssr16542 2 23156173 to 23156188 15 + TSS region transcription start site region 16542
Yme1l1 2 23156369 to 23199260 42891 + protein coding gene YME1-like 1 (S. cerevisiae)
Tssr16543 2 23156508 to 23156527 19 + TSS region transcription start site region 16543
Tssr16544 2 23187791 to 23187804 13 + TSS region transcription start site region 16544
Tssr16545 2 23191006 to 23191024 18 + TSS region transcription start site region 16545
Tssr16546 2 23196451 to 23196463 12 + TSS region transcription start site region 16546
Tssr16547 2 23197391 to 23197395 4 + TSS region transcription start site region 16547
Tssr16548 2 23197812 to 23197829 17 + TSS region transcription start site region 16548
Tssr16549 2 23201936 to 23201942 6 + TSS region transcription start site region 16549
Gm13423 2 23202033 to 23202910 877 + pseudogene predicted gene 13423
Tssr16550 2 23207458 to 23207465 7 + TSS region transcription start site region 16550
Tssr16551 2 23207470 to 23207493 23 + TSS region transcription start site region 16551
4931423N10Rik 2 23207476 to 23267129 59653 + protein coding gene RIKEN cDNA 4931423N10 gene
Cpgi11276 2 23234215 to 23234731 516 CpG island CpG island 11276
Gm13422 2 23235236 to 23235739 503 + pseudogene predicted gene 13422
Tssr426 2 23247283 to 23247285 2 + TSS region transcription start site region 426
Tssr16552 2 23259986 to 23259990 4 + TSS region transcription start site region 16552
Cpgi11277 2 23321036 to 23321584 548 CpG island CpG island 11277
Nxph2 2 23321246 to 23401973 80727 + protein coding gene neurexophilin 2
Gm34769 2 23353095 to 23367102 14007 - lncRNA gene predicted gene, 34769
A330106F07Rik 2 23492927 to 23494447 1520 unclassified gene RIKEN cDNA A330106F07 gene
Gm38309 2 23492931 to 23494448 1517 + unclassified gene predicted gene, 38309
Tssr22893 2 23496396 to 23496400 4 - TSS region transcription start site region 22893
Spopl 2 23506220 to 23572106 65886 - protein coding gene speckle-type POZ protein-like
Gm13331 2 23508860 to 23509307 447 + pseudogene predicted gene 13331
Tssr22894 2 23521985 to 23522000 15 - TSS region transcription start site region 22894
Tssr22895 2 23524068 to 23524079 11 - TSS region transcription start site region 22895
Cpgi11278 2 23571506 to 23572170 664 CpG island CpG island 11278
Tssr22896 2 23572038 to 23572112 74 - TSS region transcription start site region 22896
Mnctp2 2 23572688 to 23572688 0 QTL percent monocytes 2
Sh3d2c-ps1 2 23680218 to 23681121 903 + pseudogene SH3 domain protein 2C, pseudogene 1
Gm26323 2 23823053 to 23823227 174 + unclassified non-coding RNA gene predicted gene, 26323
Gm13392 2 23908441 to 23908590 149 + pseudogene predicted gene 13392