Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:22745522-23090266

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr16493 2 22755971 to 22755981 10 + TSS region transcription start site region 16493
Tssr16494 2 22755984 to 22755993 9 + TSS region transcription start site region 16494
1700092C17Rik 2 22755984 to 22762273 6289 + lincRNA gene RIKEN cDNA 1700092C17 gene
Tssr22869 2 22761317 to 22761334 17 - TSS region transcription start site region 22869
Gm13356 2 22762744 to 22763078 334 - pseudogene predicted gene 13356
Tssr16495 2 22773944 to 22773955 11 + TSS region transcription start site region 16495
Tssr16496 2 22773970 to 22773986 16 + TSS region transcription start site region 16496
Tssr16497 2 22774019 to 22774042 23 + TSS region transcription start site region 16497
Tssr16498 2 22774051 to 22774072 21 + TSS region transcription start site region 16498
Tssr16499 2 22774081 to 22774096 15 + TSS region transcription start site region 16499
Apbb1ip 2 22774094 to 22875653 101559 + protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
Cpgi11271 2 22774196 to 22774640 444 CpG island CpG island 11271
Tssr16500 2 22774282 to 22774298 16 + TSS region transcription start site region 16500
Tssr424 2 22774292 to 22774333 41 - TSS region transcription start site region 424
Tssr16501 2 22774317 to 22774337 20 + TSS region transcription start site region 16501
Tssr16502 2 22774338 to 22774370 32 + TSS region transcription start site region 16502
Tssr16503 2 22774373 to 22774424 51 + TSS region transcription start site region 16503
Tssr16504 2 22774432 to 22774472 40 + TSS region transcription start site region 16504
Tssr16505 2 22774474 to 22774481 7 + TSS region transcription start site region 16505
Tssr22870 2 22775265 to 22775279 14 - TSS region transcription start site region 22870
Tssr16506 2 22779532 to 22779605 73 + TSS region transcription start site region 16506
Tssr16507 2 22779916 to 22779934 18 + TSS region transcription start site region 16507
Tssr16508 2 22785699 to 22785701 2 + TSS region transcription start site region 16508
Tssr16509 2 22799611 to 22799645 34 + TSS region transcription start site region 16509
Tssr16510 2 22804627 to 22804639 12 + TSS region transcription start site region 16510
Tssr16511 2 22804643 to 22804656 13 + TSS region transcription start site region 16511
Tssr16512 2 22804745 to 22804768 23 + TSS region transcription start site region 16512
Tssr16513 2 22816518 to 22816536 18 + TSS region transcription start site region 16513
Tssr16514 2 22823429 to 22823441 12 + TSS region transcription start site region 16514
Tssr16515 2 22823505 to 22823538 33 + TSS region transcription start site region 16515
Tssr16516 2 22834302 to 22834342 40 + TSS region transcription start site region 16516
Tssr16517 2 22853143 to 22853161 18 + TSS region transcription start site region 16517
Tssr16518 2 22855175 to 22855204 29 + TSS region transcription start site region 16518
Tssr16519 2 22860741 to 22860749 8 + TSS region transcription start site region 16519
Tssr16520 2 22869377 to 22869381 4 + TSS region transcription start site region 16520
Tssr16521 2 22874840 to 22874852 12 + TSS region transcription start site region 16521
Tssr22871 2 22874980 to 22875004 24 - TSS region transcription start site region 22871
Tssr22872 2 22875028 to 22875048 20 - TSS region transcription start site region 22872
Cpgi11272 2 22895218 to 22896204 986 CpG island CpG island 11272
A130006I12Rik 2 22895321 to 22895736 415 - pseudogene RIKEN cDNA A130006I12 gene
Tssr16522 2 22895482 to 22895485 3 + TSS region transcription start site region 16522
Tssr22873 2 22895498 to 22895559 61 - TSS region transcription start site region 22873
Pdss1 2 22895522 to 22940266 44744 + protein coding gene prenyl (solanesyl) diphosphate synthase, subunit 1
Tssr16523 2 22895559 to 22895568 9 + TSS region transcription start site region 16523
Tssr16524 2 22895583 to 22895629 46 + TSS region transcription start site region 16524
Gm25544 2 22902388 to 22902507 119 + snoRNA gene predicted gene, 25544
Gm14441 2 22913293 to 22913832 539 - pseudogene predicted gene 14441
Tssr22874 2 22913876 to 22913883 7 - TSS region transcription start site region 22874
Tssr16525 2 22914663 to 22914682 19 + TSS region transcription start site region 16525
Tssr16526 2 22928557 to 22928562 5 + TSS region transcription start site region 16526
Abi1 2 22940073 to 23040241 100168 - protein coding gene abl-interactor 1
Tssr22875 2 22941899 to 22941949 50 - TSS region transcription start site region 22875
Tssr22876 2 22950688 to 22950707 19 - TSS region transcription start site region 22876
Tssr22877 2 22953534 to 22953567 33 - TSS region transcription start site region 22877
Tssr22878 2 22960836 to 22960856 20 - TSS region transcription start site region 22878
Tssr16527 2 22971116 to 22971137 21 + TSS region transcription start site region 16527
Tssr22879 2 22987548 to 22987589 41 - TSS region transcription start site region 22879
Tssr22880 2 22988202 to 22988203 1 - TSS region transcription start site region 22880
Tssr22881 2 22988809 to 22988819 10 - TSS region transcription start site region 22881
Tssr22882 2 22989240 to 22989260 20 - TSS region transcription start site region 22882
2210402A03Rik 2 22991493 to 22993451 1958 unclassified gene RIKEN cDNA 2210402A03 gene
Gm13357 2 23019131 to 23019667 536 - pseudogene predicted gene 13357
Tssr22883 2 23021626 to 23021629 3 - TSS region transcription start site region 22883
Tssr22884 2 23026086 to 23026093 7 - TSS region transcription start site region 22884
Tssr22885 2 23034989 to 23034994 5 - TSS region transcription start site region 22885
Tssr22886 2 23036145 to 23036159 14 - TSS region transcription start site region 22886
Tssr16528 2 23039290 to 23039324 34 + TSS region transcription start site region 16528
Cpgi11273 2 23039308 to 23040227 919 CpG island CpG island 11273
Tssr22887 2 23040092 to 23040127 35 - TSS region transcription start site region 22887
Tssr22888 2 23040138 to 23040174 36 - TSS region transcription start site region 22888
Tssr22889 2 23040177 to 23040201 24 - TSS region transcription start site region 22889
Acbd5 2 23067689 to 23114513 46824 + protein coding gene acyl-Coenzyme A binding domain containing 5
Tssr22890 2 23068016 to 23068058 42 - TSS region transcription start site region 22890
Cpgi11274 2 23068039 to 23069625 1586 CpG island CpG island 11274
Tssr16529 2 23068217 to 23068241 24 + TSS region transcription start site region 16529
Tssr16530 2 23068261 to 23068284 23 + TSS region transcription start site region 16530
Tssr16531 2 23069057 to 23069089 32 + TSS region transcription start site region 16531
Tssr16532 2 23069117 to 23069144 27 + TSS region transcription start site region 16532
Tssr16533 2 23069149 to 23069169 20 + TSS region transcription start site region 16533
Tssr16534 2 23069188 to 23069208 20 + TSS region transcription start site region 16534
Tssr16535 2 23069210 to 23069252 42 + TSS region transcription start site region 16535
Tssr22891 2 23069271 to 23069283 12 - TSS region transcription start site region 22891
Tssr16536 2 23069413 to 23069424 11 + TSS region transcription start site region 16536
Tssr16537 2 23069441 to 23069455 14 + TSS region transcription start site region 16537