Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:21228833-22614167

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm13378 2 21244105 to 21244440 335 + pseudogene predicted gene 13378
Tssr16467 2 21306894 to 21306896 2 + TSS region transcription start site region 16467
Gm13327 2 21341925 to 21369111 27186 - antisense lncRNA gene predicted gene 13327
Cpgi11263 2 21367336 to 21368105 769 CpG island CpG island 11263
Tssr16468 2 21367532 to 21367540 8 + TSS region transcription start site region 16468
Tssr16469 2 21367547 to 21367548 1 + TSS region transcription start site region 16469
Tssr16470 2 21367567 to 21367596 29 + TSS region transcription start site region 16470
Gpr158 2 21367567 to 21830544 462977 + protein coding gene G protein-coupled receptor 158
Tssr16471 2 21367598 to 21367617 19 + TSS region transcription start site region 16471
Tssr16472 2 21367821 to 21367870 49 + TSS region transcription start site region 16472
Cpgi11264 2 21368382 to 21369231 849 CpG island CpG island 11264
Gm13379 2 21442909 to 21443529 620 - pseudogene predicted gene 13379
Tssr421 2 21501863 to 21501871 8 + TSS region transcription start site region 421
Tssr16473 2 21509083 to 21509085 2 + TSS region transcription start site region 16473
Tssr16474 2 21650436 to 21650439 3 + TSS region transcription start site region 16474
Gm24886 2 21794933 to 21795055 122 - snoRNA gene predicted gene, 24886
Gm39766 2 21795101 to 21817155 22054 - lncRNA gene predicted gene, 39766
Gm39767 2 21878833 to 21964167 85334 - lncRNA gene predicted gene, 39767
Tssr422 2 21986194 to 21986195 1 + TSS region transcription start site region 422
D2Mit79 2 22013043 to 22013252 209 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 79
Gm13337 2 22067826 to 22069419 1593 + pseudogene predicted gene 13337
Cpgi11265 2 22227246 to 22227681 435 CpG island CpG island 11265
Myo3a 2 22227503 to 22618252 390749 + protein coding gene myosin IIIA
Tssr16475 2 22227540 to 22227582 42 + TSS region transcription start site region 16475
Cpgi11266 2 22338450 to 22338852 402 CpG island CpG island 11266
Gm13342 2 22410525 to 22410731 206 - pseudogene predicted gene 13342
Tssr22854 2 22416716 to 22416725 9 - TSS region transcription start site region 22854
Gm13341 2 22587291 to 22587962 671 - pseudogene predicted gene 13341
Gm13340 2 22588103 to 22589647 1544 - pseudogene predicted gene 13340
Cpgi11267 2 22588552 to 22589766 1214 CpG island CpG island 11267
Tssr16476 2 22588981 to 22589011 30 + TSS region transcription start site region 16476
Tssr16477 2 22589031 to 22589043 12 + TSS region transcription start site region 16477
Tssr22855 2 22589044 to 22589087 43 - TSS region transcription start site region 22855
Tssr423 2 22589150 to 22589159 9 + TSS region transcription start site region 423
Tssr22856 2 22589424 to 22589449 25 - TSS region transcription start site region 22856
Gm13339 2 22590024 to 22590533 509 - pseudogene predicted gene 13339
Tssr22857 2 22590214 to 22590215 1 - TSS region transcription start site region 22857
Tssr22858 2 22590259 to 22590275 16 - TSS region transcription start site region 22858
Tssr22859 2 22590297 to 22590305 8 - TSS region transcription start site region 22859