Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:20846605-21166792

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap21 2 20847919 to 20968640 120721 - protein coding gene Rho GTPase activating protein 21
Tssr22837 2 20870031 to 20870045 14 - TSS region transcription start site region 22837
D2Mit6 2 20892967 to 20893101 134 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 6
Gm13380 2 20921860 to 20931389 9529 - sense intronic lncRNA gene predicted gene 13380
Tssr22838 2 20924901 to 20924905 4 - TSS region transcription start site region 22838
Tssr22839 2 20943389 to 20943412 23 - TSS region transcription start site region 22839
Tssr22840 2 20943413 to 20943424 11 - TSS region transcription start site region 22840
Tssr22841 2 20943425 to 20943442 17 - TSS region transcription start site region 22841
Tssr16460 2 20967348 to 20967365 17 + TSS region transcription start site region 16460
Cpgi11260 2 20967797 to 20970064 2267 CpG island CpG island 11260
Tssr22842 2 20968550 to 20968613 63 - TSS region transcription start site region 22842
Tssr16461 2 20968665 to 20968697 32 + TSS region transcription start site region 16461
Tssr16462 2 20968702 to 20968715 13 + TSS region transcription start site region 16462
Tssr16463 2 20968731 to 20968744 13 + TSS region transcription start site region 16463
Tssr22843 2 20968943 to 20968957 14 - TSS region transcription start site region 22843
Tssr22844 2 20968973 to 20968984 11 - TSS region transcription start site region 22844
Tssr22845 2 20968987 to 20968999 12 - TSS region transcription start site region 22845
Gm13375 2 20969054 to 20969997 943 + antisense lncRNA gene predicted gene 13375
Tssr16464 2 20969068 to 20969097 29 + TSS region transcription start site region 16464
Tssr22846 2 20969252 to 20969282 30 - TSS region transcription start site region 22846
Tssr22847 2 20969571 to 20969586 15 - TSS region transcription start site region 22847
Tssr16465 2 20970254 to 20970257 3 + TSS region transcription start site region 16465
D2Mit80 2 21006605 to 21006792 187 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 80
Tssr22848 2 21024160 to 21024166 6 - TSS region transcription start site region 22848
Gm13377 2 21044809 to 21139682 94873 - pseudogene predicted gene 13377
Gm13376 2 21097099 to 21120659 23560 + lincRNA gene predicted gene 13376
C130046B21Rik 2 21140917 to 21144205 3288 unclassified gene RIKEN cDNA C130046B21 gene
Cpgi11261 2 21141635 to 21142461 826 CpG island CpG island 11261
D2Mit69 2 21150234 to 21150411 177 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 69
Hrtq1 2 119064359 to 20892967 -98171392 QTL heart weight QTL 1
Lvrq1 2 119064359 to 20892967 -98171392 QTL liver weight QTL 1
Splq1 2 119064359 to 20892967 -98171392 QTL spleen weight QTL 1
W6q1 2 119064359 to 20892967 -98171392 QTL weight 6 weeks QTL 1
Kidq1 2 119064359 to 20892967 -98171392 QTL kidney weight QTL 1
Estoq1 2 119064359 to 20892967 -98171392 QTL embryo survival total QTL 1
Egq1 2 119064359 to 20892967 -98171392 QTL early growth QTL 1
W10q9 2 119064359 to 20892967 -98171392 QTL weight 10 weeks QTL 9
W3q1 2 119064359 to 20892967 -98171392 QTL weight 3 weeks QTL 1