Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:19885045-20586064

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44457 2 19888653 to 19888728 75 + miRNA gene predicted gene, 44457
Cpgi11258 2 19909369 to 19910444 1075 CpG island CpG island 11258
Etl4 2 19909763 to 20810535 900772 + protein coding gene enhancer trap locus 4
Tssr16424 2 19909769 to 19909785 16 + TSS region transcription start site region 16424
Tssr16425 2 19909797 to 19909829 32 + TSS region transcription start site region 16425
Tssr16426 2 19909832 to 19909843 11 + TSS region transcription start site region 16426
Tssr16427 2 19909996 to 19910007 11 + TSS region transcription start site region 16427
Gm25859 2 19934863 to 19934953 90 + snoRNA gene predicted gene, 25859
Gm13361 2 19965967 to 19967397 1430 - pseudogene predicted gene 13361
Gm13363 2 19992921 to 19993442 521 + pseudogene predicted gene 13363
Gm13360 2 20037096 to 20037894 798 - pseudogene predicted gene 13360
Tssr16428 2 20209653 to 20209674 21 + TSS region transcription start site region 16428
Gm13328 2 20235045 to 20236064 1019 - pseudogene predicted gene 13328
Gm23970 2 20280519 to 20280625 106 + snRNA gene predicted gene, 23970
D2Ucl3 2 20300574 to 20300684 110 DNA segment DNA segment, Chr 2, University College London 3
Gm17171 2 20300817 to 20324670 23853 - antisense lncRNA gene predicted gene 17171
Tssr22824 2 20339401 to 20339403 2 - TSS region transcription start site region 22824
Tssr22825 2 20339428 to 20339444 16 - TSS region transcription start site region 22825
Tssr16429 2 20339578 to 20339601 23 + TSS region transcription start site region 16429
Tssr22826 2 20341097 to 20341136 39 - TSS region transcription start site region 22826
Tssr16430 2 20355760 to 20355768 8 + TSS region transcription start site region 16430
Tssr16431 2 20370212 to 20370219 7 + TSS region transcription start site region 16431
Acigg1 2 20371737 to 20371737 0 QTL anti COL7 IgG1 antibody 1
Gm13335 2 20420570 to 20432934 12364 - antisense lncRNA gene predicted gene 13335
Cpgi11259 2 20519482 to 20520000 518 CpG island CpG island 11259
Tssr16432 2 20519593 to 20519651 58 + TSS region transcription start site region 16432
Tssr16433 2 20519776 to 20519835 59 + TSS region transcription start site region 16433
D2Ertd742e 2 20529477 to 20529727 250 DNA segment DNA segment, Chr 2, ERATO Doi 742, expressed
D2Mit364 2 20534431 to 20534555 124 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 364
8030447M02Rik 2 20536996 to 20539358 2362 unclassified gene RIKEN cDNA 8030447M02 gene
Tssr16434 2 20547458 to 20547470 12 + TSS region transcription start site region 16434
Tssr16435 2 20547497 to 20547514 17 + TSS region transcription start site region 16435
Tssr16436 2 20547961 to 20547972 11 + TSS region transcription start site region 16436
Tssr16437 2 20548317 to 20548321 4 + TSS region transcription start site region 16437
Tssr16438 2 20552101 to 20552105 4 + TSS region transcription start site region 16438
Gm27446 2 20559804 to 20559892 88 + unclassified non-coding RNA gene predicted gene, 27446
Tssr16439 2 20559880 to 20559905 25 + TSS region transcription start site region 16439
Tssr16440 2 20574715 to 20574719 4 + TSS region transcription start site region 16440