MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:19552244-19752348

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
4921504E06Rik	2	19462837 to 19553910	91073	-	protein coding gene	RIKEN cDNA 4921504E06 gene
Tssr22822	2	19553888 to 19553894	6	-	TSS region	transcription start site region 22822
Tssr22823	2	19553908 to 19553922	14	-	TSS region	transcription start site region 22823
Gm39764	2	19570098 to 19577472	7374	+	lncRNA gene	predicted gene, 39764
Gm13348	2	19634034 to 19636986	2952	-	antisense lncRNA gene	predicted gene 13348
Gm13343	2	19652244 to 19652348	104	-	pseudogene	predicted gene 13343
Gm3230	2	19655806 to 19657897	2091	-	lncRNA gene	predicted gene 3230
Cpgi11256	2	19657195 to 19659215	2020		CpG island	CpG island 11256
Tssr16419	2	19657720 to 19657784	64	+	TSS region	transcription start site region 16419
Tssr16420	2	19657813 to 19657824	11	+	TSS region	transcription start site region 16420
Tssr16421	2	19658055 to 19658072	17	+	TSS region	transcription start site region 16421
Otud1	2	19658062 to 19660590	2528	+	protein coding gene	OTU domain containing 1
Tssr16422	2	19660045 to 19660079	34	+	TSS region	transcription start site region 16422
Gm13346	2	19676711 to 19686157	9446	-	lincRNA gene	predicted gene 13346
Gm13347	2	19677251 to 19678585	1334	+	pseudogene	predicted gene 13347
Gm24670	2	19691288 to 19691419	131	+	snoRNA gene	predicted gene, 24670
Cpgi11257	2	19694368 to 19694568	200		CpG island	CpG island 11257
Tssr16423	2	19743589 to 19743593	4	+	TSS region	transcription start site region 16423