Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:18979249-19419263

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pip4k2a 2 18842255 to 18998126 155871 - protein coding gene phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
D2Mit362 2 18979987 to 18980101 114 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 362
Cpgi11247 2 18996733 to 18998862 2129 CpG island CpG island 11247
Tssr16400 2 18997330 to 18997348 18 + TSS region transcription start site region 16400
Tssr22811 2 18998039 to 18998059 20 - TSS region transcription start site region 22811
Tssr22812 2 18998068 to 18998084 16 - TSS region transcription start site region 22812
Tssr22813 2 18998104 to 18998118 14 - TSS region transcription start site region 22813
Tssr22814 2 18998130 to 18998202 72 - TSS region transcription start site region 22814
Tssr22815 2 18998213 to 18998303 90 - TSS region transcription start site region 22815
Tssr16401 2 18998332 to 18998378 46 + TSS region transcription start site region 16401
4930426L09Rik 2 18998343 to 18999801 1458 + unclassified gene RIKEN cDNA 4930426L09 gene
Tssr16402 2 18998388 to 18998395 7 + TSS region transcription start site region 16402
Gm33592 2 19006817 to 19016919 10102 + lncRNA gene predicted gene, 33592
Tssr16403 2 19007841 to 19007850 9 + TSS region transcription start site region 16403
Tssr16404 2 19012230 to 19012234 4 + TSS region transcription start site region 16404
Tssr22816 2 19048353 to 19048381 28 - TSS region transcription start site region 22816
Tssr16405 2 19050048 to 19050078 30 + TSS region transcription start site region 16405
Gm13332 2 19101704 to 19103098 1394 - pseudogene predicted gene 13332
Tssr16406 2 19166952 to 19166958 6 + TSS region transcription start site region 16406
Cpgi11248 2 19199222 to 19199515 293 CpG island CpG island 11248
Tssr16407 2 19199249 to 19199263 14 + TSS region transcription start site region 16407
Tssr16408 2 19199266 to 19199316 50 + TSS region transcription start site region 16408
Armc3 2 19199302 to 19310241 110939 + protein coding gene armadillo repeat containing 3
Tssr415 2 19300514 to 19300573 59 + TSS region transcription start site region 415
Tssr16409 2 19300576 to 19300601 25 + TSS region transcription start site region 16409
Tssr16410 2 19344317 to 19344326 9 + TSS region transcription start site region 16410
4930447M23Rik 2 19344317 to 19351050 6733 + lincRNA gene RIKEN cDNA 4930447M23 gene
Tssr16411 2 19344820 to 19344858 38 + TSS region transcription start site region 16411
Cpgi11249 2 19344836 to 19345021 185 CpG island CpG island 11249
Tssr16412 2 19371413 to 19371449 36 + TSS region transcription start site region 16412
Msrb2 2 19371440 to 19394976 23536 + protein coding gene methionine sulfoxide reductase B2
Cpgi11250 2 19371610 to 19372024 414 CpG island CpG island 11250
Tssr16413 2 19371640 to 19371685 45 + TSS region transcription start site region 16413
Tssr16414 2 19381358 to 19381365 7 + TSS region transcription start site region 16414
Tssr416 2 19388890 to 19388904 14 - TSS region transcription start site region 416
Tssr22817 2 19388907 to 19388925 18 - TSS region transcription start site region 22817
Tssr22818 2 19388935 to 19388944 9 - TSS region transcription start site region 22818
Tssr417 2 19389044 to 19389058 14 + TSS region transcription start site region 417