Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:181807459-182027894

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vacq1 2 178800545 to 181873487 3072942 QTL voluntary alcohol consumption QTL 1
Lfibq19 2 181090877 to 181807525 716648 QTL liver fibrosis QTL 19
Myt1 2 181763332 to 181827786 64454 + protein coding gene myelin transcription factor 1
Gm18895 2 181816678 to 181817614 936 - pseudogene predicted gene, 18895
1700074A11Rik 2 181837416 to 181837798 382 unclassified gene RIKEN cDNA 1700074A11 gene
Cpgi12940 2 181837658 to 181838119 461 CpG island CpG island 12940
Pcmtd2 2 181837854 to 181857461 19607 + protein coding gene protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2
Tssr22348 2 181837874 to 181837910 36 + TSS region transcription start site region 22348
Tssr22349 2 181837920 to 181837934 14 + TSS region transcription start site region 22349
Tssr22350 2 181846639 to 181846643 4 + TSS region transcription start site region 22350
Tssr22351 2 181850943 to 181850955 12 + TSS region transcription start site region 22351
Cpgi12941 2 181863961 to 181864884 923 CpG island CpG island 12941
Tssr28245 2 181864198 to 181864233 35 - TSS region transcription start site region 28245
Polr3k 2 181864360 to 181870830 6470 + protein coding gene polymerase (RNA) III (DNA directed) polypeptide K
Tssr22352 2 181864418 to 181864438 20 + TSS region transcription start site region 22352
Tssr22353 2 181864442 to 181864464 22 + TSS region transcription start site region 22353
D2Mit266 2 181873361 to 181873487 126 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 266
Prdt2 2 181873361 to 181873487 126 QTL prion disease incubation time 2
Tssr812 2 181887983 to 181887987 4 + TSS region transcription start site region 812
Gm5466 2 181896823 to 181898712 1889 + pseudogene predicted gene 5466
Gm40034 2 181914498 to 181918503 4005 + lncRNA gene predicted gene, 40034
Cpgi12942 2 181917459 to 181917894 435 CpG island CpG island 12942
Gm40035 2 181947914 to 181953192 5278 - protein coding gene predicted gene, 40035
Gm14496 2 181991226 to 182001087 9861 + protein coding gene predicted gene 14496