Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:181621879-181691900

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prpf6 2 181601319 to 181655661 54342 + protein coding gene pre-mRNA splicing factor 6
Tssr22333 2 181628702 to 181628705 3 + TSS region transcription start site region 22333
Tssr22334 2 181650461 to 181650466 5 + TSS region transcription start site region 22334
Tssr22335 2 181656879 to 181656900 21 + TSS region transcription start site region 22335
Gm29797 2 181657034 to 181659467 2433 + protein coding gene predicted gene, 29797
Cpgi12934 2 181659105 to 181659755 650 CpG island CpG island 12934
Gm25879 2 181662306 to 181662412 106 + snRNA gene predicted gene, 25879
Sox18 2 181669837 to 181671640 1803 - protein coding gene SRY (sex determining region Y)-box 18
Cpgi12935 2 181670143 to 181671908 1765 CpG island CpG island 12935
Tssr28225 2 181671604 to 181671605 1 - TSS region transcription start site region 28225
Tssr28226 2 181671622 to 181671645 23 - TSS region transcription start site region 28226
Cpgi12936 2 181675493 to 181675799 306 CpG island CpG island 12936
Cpgi12937 2 181679880 to 181680896 1016 CpG island CpG island 12937
Tssr22336 2 181680284 to 181680332 48 + TSS region transcription start site region 22336
Tcea2 2 181680310 to 181688071 7761 + protein coding gene transcription elongation factor A (SII), 2
Tssr811 2 181680334 to 181680341 7 + TSS region transcription start site region 811
Rgs19 2 181688419 to 181693977 5558 - protein coding gene regulator of G-protein signaling 19
Tssr28227 2 181689000 to 181689006 6 - TSS region transcription start site region 28227
Tssr22337 2 181689113 to 181689140 27 + TSS region transcription start site region 22337
Tssr28228 2 181689153 to 181689192 39 - TSS region transcription start site region 28228
Tssr28229 2 181689289 to 181689302 13 - TSS region transcription start site region 28229
Tssr28230 2 181691771 to 181691801 30 - TSS region transcription start site region 28230
Tssr28231 2 181691804 to 181691831 27 - TSS region transcription start site region 28231