MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:180966535-181038363

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm14341	2	180954464 to 180966812	12348	+	antisense lncRNA gene	predicted gene 14341
Cpgi12911	2	180966953 to 180967823	870		CpG island	CpG island 12911
Tssr22280	2	180967218 to 180967289	71	+	TSS region	transcription start site region 22280
Arfgap1	2	180967225 to 180982526	15301	+	protein coding gene	ADP-ribosylation factor GTPase activating protein 1
Tssr22281	2	180967291 to 180967303	12	+	TSS region	transcription start site region 22281
Tssr22282	2	180967624 to 180967637	13	+	TSS region	transcription start site region 22282
Tssr22283	2	180974321 to 180974325	4	+	TSS region	transcription start site region 22283
9230112E08Rik	2	180983924 to 180987275	3351	+	sense overlapping lncRNA gene	RIKEN cDNA 9230112E08 gene
Tssr22284	2	180985032 to 180985071	39	+	TSS region	transcription start site region 22284
Col20a1	2	180986535 to 181018363	31828	+	protein coding gene	collagen, type XX, alpha 1
Gm30797	2	181011991 to 181013150	1159	-	lncRNA gene	predicted gene, 30797
Tssr28150	2	181013248 to 181013298	50	-	TSS region	transcription start site region 28150
Tssr22285	2	181013434 to 181013445	11	+	TSS region	transcription start site region 22285
Tssr28151	2	181020428 to 181020449	21	-	TSS region	transcription start site region 28151
Tssr28152	2	181020577 to 181020586	9	-	TSS region	transcription start site region 28152
Chrna4	2	181022311 to 181043580	21269	-	protein coding gene	cholinergic receptor, nicotinic, alpha polypeptide 4
Tssr28153	2	181029302 to 181029319	17	-	TSS region	transcription start site region 28153