Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:180927225-181022526

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr22279 2 180929000 to 180929046 46 + TSS region transcription start site region 22279
Birc7 2 180929023 to 180934010 4987 + protein coding gene baculoviral IAP repeat-containing 7 (livin)
Nkain4 2 180934772 to 180954699 19927 - protein coding gene Na+/K+ transporting ATPase interacting 4
Tssr28147 2 180935997 to 180936011 14 - TSS region transcription start site region 28147
Cpgi12910 2 180954224 to 180954998 774 CpG island CpG island 12910
Gm14341 2 180954464 to 180966812 12348 + antisense lncRNA gene predicted gene 14341
Tssr28148 2 180954647 to 180954670 23 - TSS region transcription start site region 28148
Tssr28149 2 180954676 to 180954708 32 - TSS region transcription start site region 28149
Cpgi12911 2 180966953 to 180967823 870 CpG island CpG island 12911
Tssr22280 2 180967218 to 180967289 71 + TSS region transcription start site region 22280
Arfgap1 2 180967225 to 180982526 15301 + protein coding gene ADP-ribosylation factor GTPase activating protein 1
Tssr22281 2 180967291 to 180967303 12 + TSS region transcription start site region 22281
Tssr22282 2 180967624 to 180967637 13 + TSS region transcription start site region 22282
Tssr22283 2 180974321 to 180974325 4 + TSS region transcription start site region 22283
9230112E08Rik 2 180983924 to 180987275 3351 + sense overlapping lncRNA gene RIKEN cDNA 9230112E08 gene
Tssr22284 2 180985032 to 180985071 39 + TSS region transcription start site region 22284
Col20a1 2 180986535 to 181018363 31828 + protein coding gene collagen, type XX, alpha 1
Gm30797 2 181011991 to 181013150 1159 - lncRNA gene predicted gene, 30797
Tssr28150 2 181013248 to 181013298 50 - TSS region transcription start site region 28150
Tssr22285 2 181013434 to 181013445 11 + TSS region transcription start site region 22285
Tssr28151 2 181020428 to 181020449 21 - TSS region transcription start site region 28151
Tssr28152 2 181020577 to 181020586 9 - TSS region transcription start site region 28152
Chrna4 2 181022311 to 181043580 21269 - protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 4